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  5. LOC_Os06g41830.1

LOC_Os06g41830.1 (LOC_Os06g41830)


Aliases : LOC_Os06g41830

Description : Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase(50.4.3 : 259.2) & Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana (sp|q4v3d9|ssl10_arath : 251.0)


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41830.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT3G57030 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G59530 LAP3 Calcium-dependent phosphotriesterase superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G22020 No alias Calcium-dependent phosphotriesterase superfamily protein 0.11 OrthoFinder output from all 47 species
Aob_g07763 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16561 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22680 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g69950 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene33336.t1 Aspi01Gene33336 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45098.t1 Aspi01Gene45098 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51593.t1 Aspi01Gene51593 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60817.t1 SSL3, Aspi01Gene60817 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g030960 LAP3 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1704 0.03 OrthoFinder output from all 47 species
Ceric.09G008600.1 LAP3, Ceric.09G008600 EC_4.3 carbon-nitrogen lyase & original description:... 0.09 OrthoFinder output from all 47 species
Cre12.g549050 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g40246 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g20885 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g24160 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01010807001 LAP3 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01026127001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.05 OrthoFinder output from all 47 species
GSVIVT01026129001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01026130001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.05 OrthoFinder output from all 47 species
GSVIVT01034451001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.07 OrthoFinder output from all 47 species
GSVIVT01034669001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01034671001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01037538001 SSL3 Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05835 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11507 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_38579 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g20810.1 LOC_Os09g20810 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.04 OrthoFinder output from all 47 species
LOC_Os11g04660.1 LOC_Os11g04660 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os12g04424.1 LOC_Os12g04424 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01161 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14915 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429962g0010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_106610g0010 LAP3 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_12783g0010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_173812g0010 LAP3 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Mp4g19000.1 SSL3 Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g13231 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43332 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43333 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g44637 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18031 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17986 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20593 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c14_13140V3.1 SSL3, Pp3c14_13140 strictosidine synthase-like 3 0.03 OrthoFinder output from all 47 species
Ppi_g10382 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15546 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18224 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36894 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g053130.3.1 LAP3, Solyc03g053130 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Solyc03g114530.4.1 SS3, Solyc03g114530 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.02 OrthoFinder output from all 47 species
Solyc03g114550.2.1 Solyc03g114550 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.05 OrthoFinder output from all 47 species
Solyc07g055750.4.1 Solyc07g055750 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g01127 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g25981 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02543 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03220 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09376 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e028742_P001 Zm00001e028742 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e038523_P001 LAP3, Zm00001e038523 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 164 251
No external refs found!