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  5. LOC_Os06g41100.1

LOC_Os06g41100.1 (TGA10, bZIP65, LOC_Os06g41100)


Aliases : TGA10, bZIP65, LOC_Os06g41100

Description : transcription factor (bZIP). transcription factor (TGA)


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41100.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G08320 bZIP21, TGA9 bZIP transcription factor family protein 0.03 OrthoFinder output from all 47 species
Als_g63001 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g37760 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26684 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g10150.1 bZIP21, TGA9,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g31390.1 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.05 OrthoFinder output from all 47 species
Lfl_g09058 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13107 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ore_g12401 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27278 bZIP21, TGA9 TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03414 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Smo231160 TGA2, AHBP-1B RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Solyc04g011670.3.1 TGA1, Solyc04g011670 transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Solyc11g068370.3.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
Zm00001e019207_P002 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Zm00001e028691_P001 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Zm00001e031761_P001 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species
Zm00001e037595_P002 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.08 OrthoFinder output from all 47 species
Zm00001e039891_P001 Zm00001e039891 transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 227 300
IPR004827 bZIP 149 177
No external refs found!