LOC_Os06g40550.1 (ABCG26, WBC27, LOC_Os06g40550)

Aliases : ABCG26, WBC27, LOC_Os06g40550

Description : sporopollenin precursor exporter. subfamily ABCG transporter

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g40550.1
Cluster	HCCA: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00258490	ABCG14,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00030p00144980	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00057p00214480	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00187570	ABCG26, WBC27,...	Solute transport.primary active transport.ABC...	0.08	OrthoFinder output from all 47 species
AT3G13220	ABCG26, WBC27	ABC-2 type transporter family protein	0.14	OrthoFinder output from all 47 species
Adi_g018185	ABCG26, WBC27	sporopollenin precursor exporter *(ABCG26) & original...	0.01	OrthoFinder output from all 47 species
Ala_g02542	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g19172	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g29670	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21658	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene10922.t1	Aspi01Gene10922	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06567	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G057300.1	ABCG26, WBC27,...	subfamily ABCG transporter & original description:...	0.07	OrthoFinder output from all 47 species
Ceric.17G037500.1	Ceric.17G037500	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G074000.1	Ceric.34G074000	not classified & original description: pacid=50622980...	0.03	OrthoFinder output from all 47 species
Dac_g16939	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g11538	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g13413	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g34069	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g47725	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.12	OrthoFinder output from all 47 species
GSVIVT01001660001	No alias	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
GSVIVT01014402001	No alias	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
GSVIVT01014733001	ABCG26, WBC27	Solute transport.primary active transport.ABC...	0.11	OrthoFinder output from all 47 species
Gb_00289	ABCG26, WBC27	sporopollenin precursor exporter. subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g07347	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
MA_16472g0010	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
MA_16472g0020	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
MA_81274g0010	ABCG14	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp3g19930.1	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp6g05900.1	ABCG14	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g10128	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g29229	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44059	ABCG26, WBC27	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Pir_g13582	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g33201	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03210	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13835	ABCG26, WBC27	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g57469	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589	No alias	not classified & original description: CDS=22-1557	0.03	OrthoFinder output from all 47 species
Solyc07g065770.3.1	ABCG26, WBC27,...	ABC transporter G family member 26 OS=Arabidopsis...	0.15	OrthoFinder output from all 47 species
Solyc07g065780.2.1	ABCG26, WBC27,...	ABC transporter G family member 26 OS=Arabidopsis...	0.16	OrthoFinder output from all 47 species
Solyc12g013630.1.1	Solyc12g013630	subfamily ABCG transporter	0.16	OrthoFinder output from all 47 species
Spa_g05719	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Spa_g06146	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g28498	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e037432_P001	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.15	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
BP	GO:0017148	negative regulation of translation	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0030597	RNA glycosylase activity	IEP	HCCA
MF	GO:0030598	rRNA N-glycosylase activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034249	negative regulation of amide metabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	417	626
IPR003439	ABC_transporter-like_ATP-bd	92	242

External Links

No external refs found!

LOC_Os06g40550.1 (ABCG26, WBC27, LOC_Os06g40550)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation