Heatmap: Cluster_149 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g03670.1 (LOC_Os01g03670)
0.16 -0.94 -2.25 0.58 -0.11 -5.4 -3.04 -2.6 5.46 -4.25 -3.97 -9.41 -5.99 -5.6 -6.1 - -3.55 -8.34 - -5.72 - -11.09 -9.28 -10.9 - -5.17 -6.39 - - - - -9.18 - - - - - - - -9.77 - - -9.95 -7.14 -7.91 -7.15 -6.02 -6.65 -5.85
LOC_Os01g45130.1 (LOC_Os01g45130)
-0.26 2.0 - - - - - - 5.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os01g50300.1 (LOC_Os01g50300)
1.45 2.67 -1.26 - - - -0.68 -0.91 4.82 0.3 0.92 -0.65 -2.58 -2.09 - - -2.31 -1.94 - -2.68 - - -5.26 -3.92 1.53 - - - - - - - - -1.32 - - -1.82 -1.21 - - -4.54 - -4.43 -4.3 -1.94 - -1.84 -1.12 -
LOC_Os02g38260.1 (LOC_Os02g38260)
1.91 -0.04 -2.52 -5.74 - - -1.62 -2.31 5.35 -4.46 0.63 - -2.81 -1.84 - - -4.63 -1.95 -1.69 -6.67 -8.42 -9.27 -7.63 -8.35 - -4.79 - - - - - -7.46 - - - -5.57 - - - - - - - -5.72 - - - - -5.94
-0.44 2.04 -7.4 -6.91 - - 0.89 1.38 5.23 -6.51 -4.53 -6.2 -1.05 -1.61 - - -4.07 -1.05 - -11.32 -4.6 -6.13 -7.53 -6.48 - - - - - - - -4.29 - -3.26 - -5.4 -5.46 -5.6 -4.55 - -8.72 - - -5.55 - - -2.04 -3.13 -4.44
1.22 0.98 -1.42 -1.13 -2.11 0.75 -0.15 -0.25 3.54 -1.59 -0.93 -0.13 -0.87 -0.67 1.47 1.82 0.16 0.43 0.4 0.03 -2.38 -0.66 -2.34 -0.59 -2.48 1.8 1.66 -2.51 -3.37 -3.33 -2.57 -2.01 -2.41 -3.34 -1.78 -1.89 -2.3 -2.03 -1.85 -3.95 -2.75 -3.23 -3.21 -1.81 -2.25 -0.86 -0.42 0.06 -1.37
LOC_Os03g43790.1 (LOC_Os03g43790)
0.97 -1.81 -4.37 -1.51 -2.21 - - -6.51 5.49 - -6.38 -4.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - -7.05 - - - -4.4 -3.72 -4.02 -0.18 - -
LOC_Os03g47460.1 (LOC_Os03g47460)
0.71 1.53 -1.95 1.47 0.7 2.2 -0.66 -0.48 4.68 -1.01 -0.82 -1.69 -1.08 -1.55 -1.8 -2.76 0.14 -1.82 0.91 -1.6 -6.9 -6.71 -4.76 -5.16 -2.66 - -0.78 - - - - -1.92 - - -2.73 - - -3.42 - -4.8 -4.81 -4.7 -6.27 -1.99 -2.85 -3.62 -2.76 - -
LOC_Os03g47910.1 (LOC_Os03g47910)
0.21 0.69 - -2.86 -5.5 1.58 - -6.94 5.43 - -5.21 - - -5.08 - - -8.91 -8.17 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g51100.1 (LOC_Os03g51100)
0.62 2.26 -4.37 - - 0.98 - -1.59 5.07 - -4.27 - - - - - -2.87 -3.54 - -2.42 -3.25 -0.06 -4.03 0.3 - - - - - -1.07 - -2.97 - - - -1.04 - - - - -3.44 - -3.8 -3.96 - - 0.57 0.11 -
LOC_Os03g56890.1 (LOC_Os03g56890)
0.91 -1.02 -0.86 -0.96 -2.22 -3.39 -3.23 -4.39 5.42 -6.17 -3.9 -6.07 -6.54 -6.03 - - -1.27 -5.05 - -9.85 - - -8.9 - 0.06 - - - - - - - - - - - - - - - - - - -7.53 - -4.12 -2.74 -1.64 -2.8
1.72 0.59 -3.53 - - - -5.94 -4.6 5.45 - -7.48 - -2.07 -3.91 - - -7.31 -6.05 - -3.53 -7.43 - -7.85 - - -6.54 - - - - - -7.09 - - - - - - -6.36 - - -8.74 - -5.93 - - - - -
0.52 0.94 -2.08 -2.7 -2.44 -3.32 -0.04 -1.62 4.83 -2.2 1.45 -4.64 -0.65 0.18 -3.69 -3.71 -1.25 -1.94 1.46 0.84 -4.02 -3.73 -3.94 -3.99 -2.01 0.04 0.35 - -4.9 -4.6 - -3.9 -3.8 - - -2.06 - -5.08 -3.17 -4.61 -4.17 -4.48 -4.49 -1.22 -1.94 -1.69 -1.14 -3.28 -
LOC_Os04g41070.1 (LOC_Os04g41070)
-1.13 3.12 - - - -0.44 - -3.04 5.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.15 - - - - -
LOC_Os05g05920.1 (LOC_Os05g05920)
1.32 0.02 -6.47 0.1 -1.74 3.47 -2.91 -2.01 4.82 -0.03 1.26 - - -4.01 - - -4.2 -8.18 - -10.41 -7.22 - -6.95 - -3.16 -4.73 -4.67 - - -4.2 -4.36 - - - - - - - - - -7.11 - -6.86 -5.39 - - -0.76 - -
LOC_Os05g14260.1 (LOC_Os05g14260)
0.69 0.11 -1.44 - - - -4.82 -0.78 4.82 -0.46 1.62 -1.61 -0.58 0.01 - - -4.95 -0.15 - -0.24 -2.45 -4.34 -2.02 -3.86 - -1.81 0.84 - -1.65 - - -0.47 - -1.07 - -1.62 - -0.83 0.51 -3.68 -2.94 -1.45 -1.87 -0.34 -1.85 -0.78 -1.06 - -
LOC_Os05g40500.1 (LOC_Os05g40500)
-0.05 3.03 -1.56 -1.59 -2.39 3.97 -2.31 -4.02 4.23 -4.58 -1.38 - - -4.14 - - -3.09 -3.0 - -2.61 -2.64 - -2.69 - -1.94 - - - -1.55 -3.14 -3.4 -4.04 - - -3.05 -1.13 -3.21 -2.35 - -3.01 -2.96 -2.38 -1.62 -1.88 - -2.76 -3.24 - -
LOC_Os05g40550.1 (LOC_Os05g40550)
-0.16 2.92 -2.26 -1.33 -1.59 3.76 -4.15 -1.61 4.55 -3.48 -3.06 - -1.17 -2.18 - - -3.85 -4.09 - -2.31 - -6.59 -6.36 -5.92 - -2.88 - - - - - -4.43 - - -2.44 - - - - - - - - -1.74 -3.14 - -2.63 -3.01 -
LOC_Os05g40570.1 (LOC_Os05g40570)
-1.79 2.84 - -0.66 -4.17 -3.35 -2.53 -1.23 5.2 - -3.44 -3.47 - - - - - -1.63 - -4.87 -4.72 - -4.81 -4.78 0.39 - - - - - - -2.81 - - -1.57 -1.88 - - -2.08 -3.9 -4.32 - - -5.15 -2.54 - - - -
LOC_Os05g40580.1 (LOC_Os05g40580)
-1.13 3.38 - - -3.46 - -4.41 -1.73 5.09 - -4.57 - - -0.55 - - - -3.49 - -4.14 - -3.91 -4.55 -3.66 1.09 - - - - - - - - - - - - - - - -4.51 - - - - - - -1.83 -
LOC_Os05g40620.1 (LOC_Os05g40620)
-0.76 2.34 0.73 -0.62 -2.48 4.14 -2.29 -3.66 3.82 -1.19 1.84 - -2.29 -3.46 - - -1.58 -5.05 1.41 -2.91 - -4.75 -22.27 - - -0.66 - - - - - -3.36 - - - - - - - - - -3.7 - -4.38 -2.87 - -2.56 - -2.25
LOC_Os05g46190.1 (LOC_Os05g46190)
-1.36 2.91 -0.84 - -5.66 0.21 -4.67 - 4.62 - -4.64 -2.56 - -4.43 - - - -5.07 - -1.81 -6.1 -4.56 -5.92 -4.91 3.59 - - -2.82 - - - -4.96 - -1.52 - -2.03 -2.93 - -27.34 - - - - -4.77 - -0.77 - -1.88 -2.44
LOC_Os06g06680.1 (LOC_Os06g06680)
1.51 2.02 0.64 -4.38 -4.3 3.47 0.81 0.99 2.97 -0.96 -0.41 -0.8 -2.19 -2.05 - - -0.74 -0.99 2.4 1.27 - - - -6.03 - -1.15 0.97 - - - - -1.63 - - - - - - - -5.78 -4.22 - - -2.21 -0.72 -1.11 0.27 -1.52 0.03
0.24 0.53 0.32 -3.18 -4.28 -4.82 -2.28 -2.63 5.22 -4.61 -0.02 -4.5 -0.37 0.24 -0.23 -0.22 - -1.8 - -1.71 -4.69 -4.45 -4.53 -4.74 - -3.45 -3.52 - - -3.37 - -3.69 -3.31 - - - - - - -3.17 -2.52 -2.85 -2.97 -2.53 -2.03 -3.2 -2.83 - -
1.75 0.56 -3.21 -3.46 -4.43 - -3.2 -5.98 5.38 -5.6 -5.37 - - - - - -4.07 -3.79 -1.5 -6.0 - - - -6.57 - -4.44 - - - - - - - - - - - - - -6.85 -7.9 - - -4.03 -4.56 -1.39 -3.46 -2.87 -0.28
LOC_Os06g40784.1 (LOC_Os06g40784)
0.9 1.92 - -1.89 - - 0.75 1.04 5.14 - -2.39 - - 0.45 - - -1.36 -0.03 - - - - - - - - - - - - - - - - - - - - - - - - - 0.14 - - - - -
LOC_Os06g40880.1 (LOC_Os06g40880)
1.11 1.21 -0.27 0.56 0.26 4.41 -5.43 -2.75 4.26 -5.67 -2.86 - - - - - - -4.6 - -7.61 - - - - - - - - - - - - - - - - - - - - - - - -3.36 - -2.44 - - -
-0.54 3.19 - 0.74 -0.82 -1.88 -2.44 -0.1 5.14 - -3.56 - - - - - - - - - - - - -4.76 - - - - - - - -3.45 - - - - - - - - - - - - - - - - -
-1.45 3.2 -3.86 -0.16 - 4.24 -4.72 -3.71 3.8 - -4.57 -1.95 -1.13 -2.32 - - -0.66 -4.98 - -0.27 -2.76 -4.91 -5.03 -4.72 -0.31 - - - - - - -0.61 - - - - - - - - - - - 0.43 - - - - -
LOC_Os07g40830.1 (LOC_Os07g40830)
0.43 -0.09 - - - - 0.02 -0.58 4.37 -3.95 -0.67 - 2.29 2.83 -1.59 - -5.52 -0.26 -0.85 -3.12 -2.35 -5.46 -2.13 -5.47 - -4.07 -1.9 - -2.76 -2.58 -1.71 -2.3 -1.87 - -1.87 -3.73 -3.59 -2.51 -2.88 -4.35 -3.94 -4.52 -3.69 0.27 -0.33 -0.73 2.13 - -
LOC_Os07g43230.1 (LOC_Os07g43230)
-1.15 2.04 -0.99 -5.78 -3.11 0.63 -1.98 -2.41 5.1 -1.77 -0.03 -2.28 -5.24 -4.43 - - -3.35 -4.36 1.19 - - - -8.06 - 1.69 - - - - - - -5.16 - -3.84 - - - - - - - - - -5.15 - - -3.36 -3.08 -
-1.5 1.62 -2.99 - -3.47 -1.6 -3.72 -6.3 5.43 -4.22 -4.63 -3.6 - -1.89 - - -4.87 -5.75 - -6.4 - -6.5 - -6.31 -1.8 - - - -2.51 - - -4.0 - - - - - - - - - - - -4.18 -3.52 -4.16 -3.38 -0.85 -
0.88 -0.01 -1.97 -2.98 -3.56 -3.2 -0.55 -0.56 5.25 -2.65 -1.44 -2.51 -1.92 -1.93 -4.55 -4.56 0.25 -2.43 -1.63 -1.05 -5.66 -5.09 -5.93 -5.39 -5.05 -2.81 -1.9 - -6.71 -7.3 -6.56 -5.74 -7.24 - -7.21 -6.29 -5.27 - -4.68 -6.82 -5.97 -6.98 -6.44 -1.43 -1.95 -2.25 -2.48 -1.56 -0.86
LOC_Os08g06690.1 (LOC_Os08g06690)
-1.04 2.57 - - -3.6 0.34 - -6.02 5.35 -4.85 -3.56 -4.6 - -3.99 - - - -7.62 - -4.49 - - - - - - -2.69 - - - - - - - - - - - - -5.41 - -22.39 -21.69 - - - - - -
LOC_Os08g06890.1 (LOC_Os08g06890)
-2.61 2.27 - -4.06 - - - - 5.44 -4.11 -2.97 - - - - - - -8.66 - -5.48 - -6.6 - - - - - - -1.92 - - -4.78 - - - - - - - - - -5.12 -5.53 - - - - - -
LOC_Os08g27210.1 (LOC_Os08g27210)
2.06 1.63 - 0.58 - 1.71 -2.79 -2.79 5.01 - -2.57 - - -0.88 - -1.02 - - - -2.24 - - - - -0.97 - - - - - - - - - - - - - - - - - - -5.45 -2.46 0.21 -2.27 -0.54 -2.55
1.47 0.22 -3.34 -3.82 -6.64 -3.39 -2.42 -2.75 5.15 -1.69 -1.44 -0.42 -2.02 -1.86 -0.44 -0.44 -1.1 -1.65 -1.68 -1.58 -4.07 -4.28 -4.22 -3.04 -3.27 -1.45 -0.63 -4.45 - -3.2 -6.39 -3.72 -3.62 -5.7 - -4.14 -5.09 -5.59 -4.08 -4.58 -4.02 -4.39 -3.81 -1.97 -1.14 -1.28 -1.74 -0.79 -4.18
LOC_Os09g13930.1 (LOC_Os09g13930)
-0.37 -0.93 -4.78 - - - -1.81 -1.61 5.28 -3.72 -3.07 -5.65 -2.26 -1.42 - - -5.52 -1.17 -1.66 -3.91 -7.85 -4.03 -7.86 -5.31 -2.27 -4.87 - - - - - - - - - - - - - - -8.21 -6.68 - -5.89 - -3.55 2.08 -0.02 -0.2
0.12 -0.39 -1.66 -0.95 -0.0 1.26 0.86 1.0 3.24 -0.89 -1.09 1.59 0.43 0.12 0.19 0.14 0.2 0.16 -0.35 0.48 -1.62 -1.35 -1.52 -1.49 1.14 0.51 0.58 -1.47 -2.0 -1.95 -2.13 -1.38 -1.5 -2.89 -1.36 -1.0 -1.33 -1.19 -1.31 -2.22 -1.5 -1.85 -1.4 0.22 0.29 -0.29 -1.33 -1.13 -0.87
1.13 -0.63 -4.29 -8.95 - - -5.63 -4.73 5.49 -5.02 -3.95 -3.96 -6.94 -7.42 -5.44 - -1.6 -5.83 -2.17 -7.52 -6.89 -7.43 -6.97 -6.82 -5.32 -5.82 -4.73 -6.6 -4.16 - -6.88 -6.52 -6.36 - - - -5.58 -6.83 -5.39 -7.06 -5.22 -6.46 -5.15 - -4.84 -7.67 -5.8 -4.34 -4.68
LOC_Os10g38050.1 (LOC_Os10g38050)
0.24 0.43 -4.88 -1.6 -0.06 4.1 -0.0 -0.72 3.55 -0.81 0.41 -1.51 -0.97 -1.42 -3.31 -2.45 -3.31 -2.2 -1.59 -2.1 -5.01 -4.72 -5.12 -4.96 1.97 -5.02 -2.6 -6.76 -6.19 -3.29 -4.42 -3.82 -4.66 -4.77 - -3.79 -4.44 -5.99 -3.9 -6.06 -6.0 -5.76 -5.16 -0.75 0.66 -0.64 0.56 0.2 -3.11
LOC_Os11g02165.1 (LOC_Os11g02165)
1.41 0.42 -1.48 -1.82 -2.64 0.88 -0.33 -0.63 4.99 -0.84 -0.43 -3.89 -1.05 -1.78 -1.21 -2.01 -0.44 -1.8 - -0.01 -5.46 -3.84 -4.81 -4.67 -1.64 -0.78 -0.12 -4.28 - - - -5.42 - - - - - -4.74 -4.69 -5.99 -5.2 -4.74 -5.12 -0.35 -1.1 -2.9 -2.44 -1.59 -2.51
LOC_Os11g06870.1 (LOC_Os11g06870)
0.46 1.46 -5.09 -4.94 - - -1.43 -5.8 4.99 0.08 1.01 -3.34 -0.13 0.1 - - -0.24 -0.56 - -4.07 -4.85 -4.54 -4.36 -3.97 -1.3 -1.27 -1.75 - - - - -2.1 -2.54 - - -1.61 -2.47 - - -5.67 -6.51 - -3.2 -1.11 - -3.22 0.96 0.01 -
LOC_Os12g02105.1 (LOC_Os12g02105)
1.32 0.73 -0.57 -1.62 -1.89 1.59 -0.48 -1.03 4.59 0.38 0.33 -4.17 -2.52 -0.45 -0.69 -0.66 0.33 -1.66 0.8 0.41 -5.62 -6.41 -5.6 -4.7 -0.87 0.25 0.87 - - -3.4 -3.56 - - - -3.31 -3.67 - - - -5.61 -5.24 -6.0 -5.31 -0.5 -2.39 -1.8 -1.27 -3.7 -2.86
LOC_Os12g13930.1 (LOC_Os12g13930)
-0.07 -1.58 -3.8 0.05 0.08 4.92 -0.16 -0.1 3.69 -1.96 -4.81 -6.68 - - - - -6.94 -4.96 - - -8.69 -7.99 -8.44 - -3.92 - - - - -5.13 - -6.03 -4.87 - - - - - - - -7.69 - -6.02 -6.6 - -5.83 - -4.67 -
0.92 1.62 1.77 -0.74 - 3.61 0.16 0.69 3.26 -1.53 -1.82 -1.68 - - - - -1.87 -4.81 - -1.05 -1.45 -1.9 -1.7 -1.14 - -0.22 0.74 -0.07 0.87 - - -0.4 0.17 - - - - - - -1.3 -3.31 - - -2.64 1.46 -1.14 - 0.37 -
LOC_Os12g41640.1 (LOC_Os12g41640)
1.24 0.9 - -4.72 - -1.31 - - 5.36 - -4.49 -3.82 -2.71 -2.16 - - - -4.52 - -3.93 - -5.35 - - - - - - - - - - - - - - - - - - - - - -6.67 -0.03 -0.3 - -1.21 -1.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.