LOC_Os06g39960.1 (TED 5, HY5, LOC_Os06g39960)

Aliases : TED 5, HY5, LOC_Os06g39960

Description : transcription factor (bZIP). transcription factor (HY5). UV-B signal transduction transcriptional regulator

Gene families : OG0002588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002588_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g39960.1
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AT3G17609	HYH	HY5-homolog	0.04	OrthoFinder output from all 47 species
AT5G11260	TED 5, HY5	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
Aev_g01846	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Ala_g14228	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Als_g13084	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Aop_g11028	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010315	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.05	OrthoFinder output from all 47 species
Cba_g30668	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Ceric.13G093700.1	TED 5, HY5,...	regulatory protein *(HY5) of UV-B signal transduction &...	0.04	OrthoFinder output from all 47 species
Ceric.1Z124000.1	Ceric.1Z124000	not classified & original description: pacid=50620924...	0.02	OrthoFinder output from all 47 species
Cre06.g310500	HYH	External stimuli response.light.UV-B light.UV-B signal...	0.03	OrthoFinder output from all 47 species
Dac_g22408	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Dcu_g03461	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Ehy_g08079	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Gb_33985	HYH	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Msp_g10109	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Ore_g05673	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Pir_g01533	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Ppi_g26944	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Tin_g06997	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Zm00001e013997_P001	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.02	OrthoFinder output from all 47 species
Zm00001e037325_P002	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	104	163

External Links

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LOC_Os06g39960.1 (TED 5, HY5, LOC_Os06g39960)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation