LOC_Os06g30380.1 (LOC_Os06g30380)

Aliases : LOC_Os06g30380

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 538.0)

Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g30380.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00268300	evm_27.TU.AmTr_v1...	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.07	OrthoFinder output from all 47 species
AMTR_s00006p00036530	evm_27.TU.AmTr_v1...	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.04	OrthoFinder output from all 47 species
AMTR_s00064p00187430	evm_27.TU.AmTr_v1...	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.02	OrthoFinder output from all 47 species
Adi_g045219	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g045220	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g15862	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022080.6	ATNOA1, ATNOS1,...	NO-associated protein 1, chloroplastic/mitochondrial...	0.01	OrthoFinder output from all 47 species
Cre07.g315400	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.03	OrthoFinder output from all 47 species
Dcu_g19887	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08261	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01033559001	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.15	OrthoFinder output from all 47 species
Len_g19651	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Mp7g03470.1	No alias	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.08	OrthoFinder output from all 47 species
Nbi_g19658	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g16309	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024384	No alias	not classified & original description: CDS=72-1961	0.03	OrthoFinder output from all 47 species
Sam_g29882	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g009300.4.1	Solyc04g009300	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.06	OrthoFinder output from all 47 species
Spa_g00420	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e024057_P001	Zm00001e024057	GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN...	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	410	485

External Links

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LOC_Os06g30380.1 (LOC_Os06g30380)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation