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  5. LOC_Os06g13190.1

LOC_Os06g13190.1 (LOC_Os06g13190)


Aliases : LOC_Os06g13190

Description : no hits & (original description: none)


Gene families : OG0002636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13190.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00205140 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00055p00205520 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G19020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Len_g11189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434785g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_107895g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g01457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g006390.1.1 Solyc05g006390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015779_P001 Zm00001e015779 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e036058_P001 Zm00001e036058 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!