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  5. LOC_Os06g13180.1

LOC_Os06g13180.1 (MMP, LOC_Os06g13180)


Aliases : MMP, LOC_Os06g13180

Description : Matrixin-type metalloprotease


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13180.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 MMP,... Protein degradation.peptidase families.metallopeptidase... 0.09 OrthoFinder output from all 47 species
AMTR_s00106p00141160 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
AT1G24140 No alias Matrixin family protein 0.09 OrthoFinder output from all 47 species
AT1G70170 MMP matrix metalloproteinase 0.05 OrthoFinder output from all 47 species
Adi_g060237 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aev_g18141 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g03130 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene04875.t1 MMP, Aspi01Gene04875 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene08236.t1 MMP, Aspi01Gene08236 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dac_g11955 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ehy_g30544 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018206001 No alias Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
GSVIVT01020151001 MMP Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
GSVIVT01032544001 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
GSVIVT01032545001 MMP Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Gb_17716 No alias Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species
Gb_39954 MMP Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Gb_39955 MMP Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
LOC_Os10g40859.1 LOC_Os10g40859 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.08 OrthoFinder output from all 47 species
MA_364411g0010 No alias Matrixin-type metalloprotease 0.02 OrthoFinder output from all 47 species
Pir_g41391 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Smo13930 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Solyc04g005040.1.1 Solyc04g005040 Matrixin-type metalloprotease 0.08 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.09 OrthoFinder output from all 47 species
Spa_g49383 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e015780_P001 MMP, Zm00001e015780 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 62 122
IPR001818 Pept_M10_metallopeptidase 160 322
No external refs found!