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  5. LOC_Os06g05660.1

LOC_Os06g05660.1 (NFA02, NFA2, NAP1;2,...)


Aliases : NFA02, NFA2, NAP1;2, LOC_Os06g05660

Description : histone chaperone (NAP)


Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05660.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00247340 NFA03, NFA3,... Chromatin organisation.histone chaperone... 0.03 OrthoFinder output from all 47 species
Adi_g060774 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08239 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13959 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03114.t1 NFA02, NFA2,... histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11381 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14728 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01270 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15827 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35087 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011984 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: CDS=468-1400 0.02 OrthoFinder output from all 47 species
Solyc05g018810.4.1 NFA02, NFA2,... histone chaperone (NAP) 0.02 OrthoFinder output from all 47 species
Tin_g27243 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030011_P002 NFA02, NFA2,... histone chaperone (NAP) 0.02 OrthoFinder output from all 47 species
Zm00001e032269_P004 NFA02, NFA2,... histone chaperone (NAP) 0.03 OrthoFinder output from all 47 species
Zm00001e036497_P001 NFA02, NFA2,... histone chaperone (NAP) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 60 305
No external refs found!