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  5. LOC_Os06g05080.1

LOC_Os06g05080.1 (LOC_Os06g05080)


Aliases : LOC_Os06g05080

Description : component COX5b of cytochrome c oxidase complex


Gene families : OG0002056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05080.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT1G80230 No alias Rubredoxin-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g025662 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Adi_g049958 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Aop_g00295 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.07 OrthoFinder output from all 47 species
Cba_g11956 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Ceric.09G091600.1 Ceric.09G091600 not classified & original description: pacid=50588511... 0.02 OrthoFinder output from all 47 species
Ceric.34G062600.1 Ceric.34G062600 component *(COX5b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.130 No alias Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
Cre13.g567600 No alias No description available 0.06 OrthoFinder output from all 47 species
Ehy_g03322 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01035815001 No alias Cellular respiration.oxidative... 0.02 OrthoFinder output from all 47 species
Gb_38599 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Lfl_g06895 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Mp5g24540.1 No alias component COX5b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Ore_g37278 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Pir_g44978 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020028 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Sam_g46274 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Smo418496 No alias Cellular respiration.oxidative... 0.04 OrthoFinder output from all 47 species
Solyc06g067940.4.1 Solyc06g067940 component COX5b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Solyc12g042900.2.1 Solyc12g042900 component COX5b of cytochrome c oxidase complex 0.03 OrthoFinder output from all 47 species
Spa_g41843 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.08 OrthoFinder output from all 47 species
Spa_g53660 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.05 OrthoFinder output from all 47 species
Tin_g03682 No alias component *(COX5b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e020680_P001 Zm00001e020680 component COX5b of cytochrome c oxidase complex 0.06 OrthoFinder output from all 47 species
Zm00001e027857_P001 Zm00001e027857 component COX5b of cytochrome c oxidase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
CC GO:0005740 mitochondrial envelope IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002124 Cyt_c_oxidase_su5b 52 145
No external refs found!