1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g04240.1

LOC_Os06g04240.1 (LOC_Os06g04240)


Aliases : LOC_Os06g04240

Description : no hits & (original description: none)


Gene families : OG0008332 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008332_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g04240.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00110640 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G32920 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT1G32928 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
GSVIVT01038638001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_21052 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_21053 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04220.1 LOC_Os06g04220 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_183474g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_913862g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g35141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082370.1.1 Solyc03g082370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036588_P001 Zm00001e036588 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!