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  5. LOC_Os05g49620.1

LOC_Os05g49620.1 (WRKY53, ATWRKY53,...)


Aliases : WRKY53, ATWRKY53, LOC_Os05g49620

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49620.1

Target Alias Description ECC score Gene Family Method Actions
AT1G62300 WRKY6, ATWRKY6 WRKY family transcription factor 0.02 OrthoFinder output from all 47 species
AT1G66600 ABO3, WRKY63, ATWRKY63 ABA overly sensitive mutant 3 0.05 OrthoFinder output from all 47 species
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.03 OrthoFinder output from all 47 species
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.03 OrthoFinder output from all 47 species
AT4G18170 WRKY28, ATWRKY28 WRKY DNA-binding protein 28 0.02 OrthoFinder output from all 47 species
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.02 OrthoFinder output from all 47 species
AT5G01900 WRKY62, ATWRKY62 WRKY DNA-binding protein 62 0.03 OrthoFinder output from all 47 species
AT5G15130 WRKY72, ATWRKY72 WRKY DNA-binding protein 72 0.03 OrthoFinder output from all 47 species
AT5G26170 ATWRKY50, WRKY50 WRKY DNA-binding protein 50 0.04 OrthoFinder output from all 47 species
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.02 OrthoFinder output from all 47 species
Als_g56491 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10884 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18287 WRKY33, ATWRKY33 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0505.g073943 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: CDS=1-474 0.04 OrthoFinder output from all 47 species
Cba_g68595 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12166 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16670 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43124 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18841 WRKY62, ATWRKY62 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24743 ATWRKY24, WRKY24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019511001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01021397001 WRKY28, ATWRKY28 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01024624001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01027069001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01028244001 AtWRKY47, WRKY47 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01030258001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01035884001 WRKY18, ATWRKY18 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01035885001 ATWRKY40, WRKY40 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Gb_05025 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_16917 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14440.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os01g18584.1 AtWRKY47,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g61080.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
LOC_Os03g45450.1 ATWRKY71,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50610.1 ATWRKY71,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os08g29660.1 WRKY53,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os09g16510.1 WRKY46,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
LOC_Os11g29870.1 WRKY75,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Len_g16970 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_103616g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_120697g0010 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_310991g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_49848g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_52928g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_740729g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_7831917g0010 AtWRKY47, WRKY47 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g08798 WRKY31, ATWRKY31 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16993 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03208 WRKY3 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21683 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34694 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g095630.3.1 AtWRKY41,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc02g032950.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc02g071130.4.1 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc02g080890.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc03g007380.2.1 AtWRKY41,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc03g095770.3.1 ATWRKY70,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc03g116890.3.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc06g066370.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Solyc08g008280.3.1 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc09g014990.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Solyc10g009550.3.1 ATWRKY30,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Spa_g11950 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08676 WRKY2, ATWRKY2 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14530 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001512_P003 WRKY55,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e004183_P001 AtWRKY41,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e009822_P001 Zm00001e009822 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011098_P001 WRKY75,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e015980_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e016622_P001 ATWRKY50,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e016623_P001 WRKY72,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Zm00001e017439_P001 AtWRKY47,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e019418_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.04 OrthoFinder output from all 47 species
Zm00001e019448_P001 WRKY38,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e019977_P001 ATWRKY51,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e020279_P001 WRKY53,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e023991_P001 ATWRKY30,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e025935_P001 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e025937_P001 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027301_P001 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e027804_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e028832_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e031159_P001 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e033860_P001 ATWRKY30,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e033862_P001 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e037631_P001 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e039528_P002 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e042185_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 106 165
No external refs found!