Aliases : DND2, CNGC4, HLM1, ATCNGC4, LOC_Os05g42250
Description : cyclic nucleotide-gated cation channel (CNGC)
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00270020 | evm_27.TU.AmTr_v1... | External stimuli response.temperature.temperature... | 0.03 | OrthoFinder output from all 47 species | |
AT3G17700 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-binding transporter 1 | 0.02 | OrthoFinder output from all 47 species | |
AT5G57940 | CNGC5, ATCNGC5 | cyclic nucleotide gated channel 5 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g27810 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g33029 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g12676 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0050.g030979 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13170 | DND1, ATCNGC2, CNGC2 | temperature sensor protein *(CNGC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02798 | ATCNGC9, CNGC9 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01007785001 | CNGC18, ATCNGC18 | Solute transport.channels.VIC superfamily.cyclic... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01011487001 | DND1, ATCNGC2, CNGC2 | External stimuli response.temperature.temperature... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025208001 | CNGC15, ATCNGC15 | Solute transport.channels.VIC superfamily.cyclic... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01029407001 | ATCNGC20, CNGC20, CNBT1 | Solute transport.channels.VIC superfamily.cyclic... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g33600.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g30559 | DND2, CNGC4,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp3g14660.1 | DND2, CNGC4,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
Pir_g44975 | ATCNGC3, CNGC3, CNGC3.C | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g36093 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Smo416791 | DND1, ATCNGC2, CNGC2 | External stimuli response.temperature.temperature... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g116850.3.1 | ATCNGC8, CNGC8,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g051920.4.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g005400.3.1 | DND2, CNGC4,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006772_P003 | CNGC5, ATCNGC5,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012009_P001 | DND1, ATCNGC2,... | cyclic nucleotide-gated cation channel (CNGC).... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEA | Interproscan |
BP | GO:0006811 | monoatomic ion transport | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
No external refs found! |