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  5. LOC_Os05g39310.1

LOC_Os05g39310.1 (LOC_Os05g39310)


Aliases : LOC_Os05g39310

Description : pyruvate decarboxylase


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39310.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00179930 evm_27.TU.AmTr_v1... Carbohydrate metabolism.fermentation.alcoholic... 0.02 OrthoFinder output from all 47 species
AT4G33070 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.07 OrthoFinder output from all 47 species
AT5G01330 PDC3 pyruvate decarboxylase-3 0.04 OrthoFinder output from all 47 species
Als_g05001 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07261 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00476.t1 Aspi01Gene00476 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G029800.1 Ceric.39G029800 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.45 No alias Pyruvate decarboxylase 2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g41262 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50750 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003940001 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.08 OrthoFinder output from all 47 species
GSVIVT01021184001 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.03 OrthoFinder output from all 47 species
Gb_12301 PDC2 pyruvate decarboxylase 0.03 OrthoFinder output from all 47 species
Gb_33733 PDC2 pyruvate decarboxylase 0.07 OrthoFinder output from all 47 species
Gb_33734 PDC2 Pyruvate decarboxylase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_33735 PDC2 pyruvate decarboxylase 0.07 OrthoFinder output from all 47 species
Gb_36229 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g21090.1 No alias pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species
Ppi_g16757 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g076510.2.1 Solyc10g076510 pyruvate decarboxylase 0.08 OrthoFinder output from all 47 species
Zm00001e001325_P003 Zm00001e001325 pyruvate decarboxylase 0.11 OrthoFinder output from all 47 species
Zm00001e025833_P001 PDC2, Zm00001e025833 pyruvate decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e027278_P002 Zm00001e027278 pyruvate decarboxylase 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011766 TPP_enzyme_TPP-bd 451 575
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 44 208
IPR012000 Thiamin_PyroP_enz_cen_dom 241 356
No external refs found!