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  5. LOC_Os05g38180.1

LOC_Os05g38180.1 (LOC_Os05g38180)


Aliases : LOC_Os05g38180

Description : no hits & (original description: none)


Gene families : OG0002556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00035800 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G27490 No alias Integral membrane Yip1 family protein 0.03 OrthoFinder output from all 47 species
Adi_g055557 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aev_g08747 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Aob_g04058 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24865.t1 Aspi01Gene24865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024300 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ceric.05G102000.1 Ceric.05G102000 component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ceric.36G047200.1 Ceric.36G047200 component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000605.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g722700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05353 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ehy_g03392 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
GSVIVT01000042001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g28734 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Mp1g05520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00434 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Solyc05g052930.3.1 Solyc05g052930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12034 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Zm00001e020670_P001 Zm00001e020670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027853_P001 Zm00001e027853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006977 Yip1_dom 89 235
No external refs found!