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  5. LOC_Os05g26040.1

LOC_Os05g26040.1 (LOC_Os05g26040)


Aliases : LOC_Os05g26040

Description : Pumilio homolog 4 OS=Arabidopsis thaliana (sp|q9ss47|pum4_arath : 98.6)


Gene families : OG0000018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g26040.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g026898 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14434.t1 Aspi01Gene14434 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41805.t1 Aspi01Gene41805 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 1012 1133
No external refs found!