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  5. LOC_Os05g25480.1

LOC_Os05g25480.1 (AtMAN6, MAN6, LOC_Os05g25480)


Aliases : AtMAN6, MAN6, LOC_Os05g25480

Description : endo-beta-1,4-mannanase


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g25480.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 AtMAN7, MAN7,... Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00136900 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.06 OrthoFinder output from all 47 species
Aev_g08771 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17583 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48223 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07348 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09291 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G063200.1 AtMAN7, MAN7,... endo-beta-1,4-mannanase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.16G080700.1 AtMAN6, MAN6,... endo-beta-1,4-mannanase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g35257 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g41032 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14371 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13074 MAN5, AtMAN5 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030165001 AtMAN6, MAN6 Cell wall.hemicellulose.heteromannan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01037214001 AtMAN7, MAN7 Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_28909 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Gb_29706 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Gb_30579 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Gb_31304 No alias Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10432193g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
MA_6558g0010 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Mp8g06310.1 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Mp8g13360.1 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
Msp_g29671 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32648 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15664 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20785 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40855 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019841 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: CDS=1-1272 0.02 OrthoFinder output from all 47 species
Smo101148 MAN5, AtMAN5 Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
Smo101525 MAN2, AtMAN2 Cell wall.hemicellulose.heteromannan.modification and... 0.06 OrthoFinder output from all 47 species
Smo234867 MAN5, AtMAN5 Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g008720.2.1 AtMAN7, MAN7,... endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Solyc10g008300.3.1 MAN2, AtMAN2,... endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Spa_g00368 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029246_P001 AtMAN6, MAN6,... endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 119 416
No external refs found!