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  5. LOC_Os05g24140.1

LOC_Os05g24140.1 (LOC_Os05g24140)


Aliases : LOC_Os05g24140

Description : metal chelator transporter (TCR). metal chelator nicotianamine transporter (TCR)


Gene families : OG0005094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g24140.1

Target Alias Description ECC score Gene Family Method Actions
AT2G16970 MEE15 Major facilitator superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G16980 No alias Major facilitator superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G16990 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G42210 No alias Major facilitator superfamily protein 0.05 OrthoFinder output from all 47 species
GSVIVT01008736001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01023968001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Ore_g41103 No alias metal chelator nicotianamine transporter *(TCR) &... 0.04 OrthoFinder output from all 47 species
Solyc01g111840.3.1 Solyc01g111840 metal chelator transporter (TCR). metal chelator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!