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  5. LOC_Os05g23740.1

LOC_Os05g23740.1 (cpHsc70-1, LOC_Os05g23740)


Aliases : cpHsc70-1, LOC_Os05g23740

Description : chaperone (cpHsc70)


Gene families : OG0000341 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23740.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00117740 cpHsc70-1,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
AT4G24280 cpHsc70-1 chloroplast heat shock protein 70-1 0.08 OrthoFinder output from all 47 species
AT5G09590 HSC70-5, MTHSC70-2 mitochondrial HSO70 2 0.11 OrthoFinder output from all 47 species
AT5G49910 CPHSC70-2EAT... chloroplast heat shock protein 70-2 0.08 OrthoFinder output from all 47 species
Adi_g045189 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113250 cpHsc70-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03192 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Als_g33603 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01121.t1 HSC70-5,... chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008005 cpHsc70-1 chaperone *(cpHsc70)) & original description: CDS=241-2397 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030878 cpHsc70-1 not classified & original description: CDS=418-2490 0.05 OrthoFinder output from all 47 species
Ceric.02G023500.1 cpHsc70-1,... chaperone *(cpHsc70)) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G023700.1 cpHsc70-1,... chaperone *(cpHsc70)) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.36G024300.1 cpHsc70-1,... chaperone *(cpHsc70)) & original description:... 0.04 OrthoFinder output from all 47 species
Cre06.g250100 cpHsc70-1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Cre09.g393200 HSC70-5, MTHSC70-2 External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Dde_g08447 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48984 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.04 OrthoFinder output from all 47 species
GSVIVT01008331001 cpHsc70-1 Stromal 70 kDa heat shock-related protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
GSVIVT01026014001 cpHsc70-1 Stromal 70 kDa heat shock-related protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
GSVIVT01038517001 HSC70-5, MTHSC70-2 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Gb_12927 HSC70-5, MTHSC70-2 chaperone HSCA of mitochondrial ISC system transfer... 0.05 OrthoFinder output from all 47 species
Len_g05054 HSC70-5, MTHSC70-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12211 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18613 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.07 OrthoFinder output from all 47 species
MA_2041g0020 CPHSC70-2EAT... Stromal 70 kDa heat shock-related protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_6445935g0010 CPHSC70-2EAT... Stromal 70 kDa heat shock-related protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp8g13250.1 cpHsc70-1 chaperone (cpHsc70) 0.03 OrthoFinder output from all 47 species
Nbi_g13763 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.06 OrthoFinder output from all 47 species
Ore_g07288 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c26_10600V3.1 cpHsc70-1, Pp3c26_10600 chloroplast heat shock protein 70-2 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004368 cpHsc70-1 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Sam_g10027 No alias chaperone component *(mtHSP70) of inner mitochondrion... 0.02 OrthoFinder output from all 47 species
Smo168287 HSC70-5, MTHSC70-2 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Smo267815 cpHsc70-1 External stimuli response.temperature.Hsp... 0.1 OrthoFinder output from all 47 species
Solyc01g103450.3.1 cpHsc70-1, Solyc01g103450 chaperone (cpHsc70) 0.05 OrthoFinder output from all 47 species
Solyc01g106210.3.1 HSC70-5,... chaperone HSCA of mitochondrial ISC system transfer... 0.05 OrthoFinder output from all 47 species
Solyc11g020040.2.1 cpHsc70-1, Solyc11g020040 chaperone (cpHsc70) 0.05 OrthoFinder output from all 47 species
Spa_g09377 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Spa_g15298 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g15607 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Spa_g22472 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.02 OrthoFinder output from all 47 species
Spa_g23150 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g23984 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.05 OrthoFinder output from all 47 species
Spa_g40013 cpHsc70-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52505 cpHsc70-1 chaperone *(cpHsc70)) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g56377 cpHsc70-1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g56840 cpHsc70-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11775 HSC70-5, MTHSC70-2 chaperone component *(mtHSP70) of inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Zm00001e005333_P001 cpHsc70-1, Zm00001e005333 chaperone (cpHsc70) 0.13 OrthoFinder output from all 47 species
Zm00001e012247_P001 cpHsc70-1, Zm00001e012247 chaperone (cpHsc70) 0.09 OrthoFinder output from all 47 species
Zm00001e012533_P002 HSC70-5,... chaperone HSCA of mitochondrial ISC system transfer... 0.06 OrthoFinder output from all 47 species
Zm00001e017846_P002 cpHsc70-1, Zm00001e017846 chaperone (cpHsc70) 0.11 OrthoFinder output from all 47 species
Zm00001e039661_P002 cpHsc70-1, Zm00001e039661 chaperone (cpHsc70) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 52 646
No external refs found!