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  5. LOC_Os05g23620.1

LOC_Os05g23620.1 (LOC_Os05g23620)


Aliases : LOC_Os05g23620

Description : cytochrome c1 component of cytochrome c reductase complex


Gene families : OG0002705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23620.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00204710 evm_27.TU.AmTr_v1... Cellular respiration.oxidative... 0.05 OrthoFinder output from all 47 species
AT3G27240 No alias Cytochrome C1 family 0.24 OrthoFinder output from all 47 species
Als_g04882 No alias apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Aob_g04964 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Aop_g00430 No alias apocytochrome c1 component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Azfi_s0262.g060839 No alias apocytochrome c1 component of cytochrome c reductase... 0.1 OrthoFinder output from all 47 species
Ceric.32G048300.1 Ceric.32G048300 apocytochrome c1 component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000203.23 No alias Cellular respiration.oxidative... 0.09 OrthoFinder output from all 47 species
Cre15.g638500 No alias Cellular respiration.oxidative... 0.12 OrthoFinder output from all 47 species
Dac_g02686 No alias apocytochrome c1 component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Dcu_g04611 No alias apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Ehy_g08245 No alias apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
GSVIVT01001830001 No alias Cellular respiration.oxidative... 0.1 OrthoFinder output from all 47 species
Len_g18197 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
MA_10429544g0010 No alias cytochrome c1 component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
MA_10429544g0030 No alias cytochrome c1 component of cytochrome c reductase complex 0.07 OrthoFinder output from all 47 species
Mp8g04690.1 No alias cytochrome c1 component of cytochrome c reductase complex 0.15 OrthoFinder output from all 47 species
Msp_g01940 No alias apocytochrome c1 component of cytochrome c reductase... 0.05 OrthoFinder output from all 47 species
Nbi_g00469 No alias apocytochrome c1 component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Ore_g06373 No alias apocytochrome c1 component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Pir_g02514 No alias apocytochrome c1 component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Smo177642 No alias Cellular respiration.oxidative... 0.07 OrthoFinder output from all 47 species
Solyc02g093900.3.1 Solyc02g093900 cytochrome c1 component of cytochrome c reductase complex 0.19 OrthoFinder output from all 47 species
Solyc06g067920.3.1 Solyc06g067920 cytochrome c1 component of cytochrome c reductase complex 0.1 OrthoFinder output from all 47 species
Spa_g26253 No alias apocytochrome c1 component of cytochrome c reductase... 0.05 OrthoFinder output from all 47 species
Spa_g43323 No alias apocytochrome c1 component of cytochrome c reductase... 0.03 OrthoFinder output from all 47 species
Tin_g21468 No alias apocytochrome c1 component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Zm00001e003946_P001 Zm00001e003946 cytochrome c1 component of cytochrome c reductase complex 0.24 OrthoFinder output from all 47 species
Zm00001e022083_P001 Zm00001e022083 cytochrome c1 component of cytochrome c reductase complex 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002326 Cyt_c1 75 291
No external refs found!