1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g11900.1

LOC_Os05g11900.1 (LOC_Os05g11900)


Aliases : LOC_Os05g11900

Description : no hits & (original description: none)


Gene families : OG0008421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g11900.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G081200.1 Ceric.06G081200 not classified & original description: pacid=50619826... 0.04 OrthoFinder output from all 47 species
GSVIVT01014277001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g11600.1 LOC_Os01g11600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_19826g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_41022g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g11390.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g008050.2.1 Solyc10g008050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g008730.3.1 Solyc10g008730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!