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  5. LOC_Os05g07860.1

LOC_Os05g07860.1 (LOC_Os05g07860)


Aliases : LOC_Os05g07860

Description : no hits & (original description: none)


Gene families : OG0008843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07860.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Adi_g010079 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.04 OrthoFinder output from all 47 species
Als_g13377 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39351.t1 Aspi01Gene39351 substrate adaptor *(PDIP38-like) of mitochondrion... 0.02 OrthoFinder output from all 47 species
Cba_g36245 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.59 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01007727001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g13606 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.03 OrthoFinder output from all 47 species
Sam_g18246 No alias substrate adaptor *(PDIP38-like) of mitochondrion... 0.04 OrthoFinder output from all 47 species
Solyc12g021360.3.1 Solyc12g021360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026715_P001 Zm00001e026715 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007474 ApaG_domain 185 269
IPR001943 UVR_dom 130 155
No external refs found!