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  5. LOC_Os05g05480.1

LOC_Os05g05480.1 (DEGP2, LOC_Os05g05480)


Aliases : DEGP2, LOC_Os05g05480

Description : protease (Deg)


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05480.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00143260 DEGP2,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
AT2G47940 DEGP2 DEGP protease 2 0.16 OrthoFinder output from all 47 species
Aev_g01298 DEGP2 protease *(Deg) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12615 DEGP2 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58991 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07091 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0024.g020307 DEGP2 protease *(Deg) & original description: CDS=143-1906 0.02 OrthoFinder output from all 47 species
Cba_g18056 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G009600.1 DEGP2, Ceric.06G009600 protease *(Deg) & original description: pacid=50619443... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.68 DegP9 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Dde_g17085 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04889 DEGP2 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011007001 DEGP2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_10855 DEGP2 protease (Deg) 0.09 OrthoFinder output from all 47 species
Len_g20948 DEGP2 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g23130.1 DegP9 protease (Deg) 0.1 OrthoFinder output from all 47 species
Pnu_g13145 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06908 DEGP2 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Smo100929 DEGP2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Solyc06g084480.3.1 DEGP2, Solyc06g084480 protease (Deg) 0.04 OrthoFinder output from all 47 species
Solyc09g074420.4.1 DEGP2, Solyc09g074420 protease (Deg) 0.15 OrthoFinder output from all 47 species
Spa_g12286 DEGP2 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18830 DEGP2 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040416_P002 DEGP2, Zm00001e040416 protease (Deg) 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001478 PDZ 311 409
IPR041517 DEGP_PDZ 418 559
No external refs found!