LOC_Os05g02640.1 (aTNUDT9, NUDT9, LOC_Os05g02640)

Aliases : aTNUDT9, NUDT9, LOC_Os05g02640

Description : GDP-D-mannose pyrophosphohydrolase

Gene families : OG0006742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g02640.1
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aev_g28776	aTNUDT9, NUDT9	GDP-D-mannose pyrophosphohydrolase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g072970.2.1	aTNUDT9, NUDT9,...	GDP-D-mannose pyrophosphohydrolase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!