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  5. LOC_Os05g01510.2

LOC_Os05g01510.2 (LOC_Os05g01510)


Aliases : LOC_Os05g01510

Description : no hits & (original description: none)


Gene families : OG0001449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01510.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00107290 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene41660.t1 Aspi01Gene41660 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G045300.1 Ceric.03G045300 not classified & original description: pacid=50571954... 0.02 OrthoFinder output from all 47 species
Len_g02651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR018639 DUF2062 22 159
No external refs found!