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  5. LOC_Os04g58060.1

LOC_Os04g58060.1 (ATPRMT6, PRMT6, LOC_Os04g58060)


Aliases : ATPRMT6, PRMT6, LOC_Os04g58060

Description : Probable protein arginine N-methyltransferase 6.1 OS=Oryza sativa subsp. japonica (sp|q7xkc0|anm61_orysj : 685.0)


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58060.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.06 OrthoFinder output from all 47 species
Ala_g22341 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.04 OrthoFinder output from all 47 species
Azfi_s0553.g076649 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.02 OrthoFinder output from all 47 species
Ore_g34024 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36048 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Pir_g04984 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018602 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=1-1554 0.02 OrthoFinder output from all 47 species
Sam_g26734 No alias ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Solyc01g096550.3.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.03 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.04 OrthoFinder output from all 47 species
Zm00001e041934_P002 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!