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  5. LOC_Os04g55650.1

LOC_Os04g55650.1 (LOC_Os04g55650)


Aliases : LOC_Os04g55650

Description : Oryzain alpha chain OS=Oryza sativa subsp. japonica (sp|p25776|orya_orysj : 496.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 246.5)


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55650.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00031000 XBCP3,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00178750 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00178760 XCP1,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00165270 XCP1,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AT1G20850 XCP2 xylem cysteine peptidase 2 0.02 OrthoFinder output from all 47 species
AT1G29080 No alias Papain family cysteine protease 0.02 OrthoFinder output from all 47 species
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 OrthoFinder output from all 47 species
AT4G11310 No alias Papain family cysteine protease 0.02 OrthoFinder output from all 47 species
AT4G11320 No alias Papain family cysteine protease 0.03 OrthoFinder output from all 47 species
AT4G35350 XCP1 xylem cysteine peptidase 1 0.02 OrthoFinder output from all 47 species
AT4G36880 CP1 cysteine proteinase1 0.03 OrthoFinder output from all 47 species
AT5G45890 SAG12 senescence-associated gene 12 0.03 OrthoFinder output from all 47 species
AT5G50260 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g024466 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Adi_g082069 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Adi_g113090 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Adi_g113689 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aev_g00916 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aev_g09797 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aev_g17587 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ala_g01428 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ala_g12318 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Als_g11953 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Als_g11955 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Als_g41015 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g61153 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g07150 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11884.t1 Aspi01Gene11884 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14357.t1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40405.t1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene50405.t1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000770 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cba_g11467 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Cba_g15443 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cba_g17284 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Cba_g17285 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ceric.04G100700.1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Ceric.09G084700.1 Ceric.09G084700 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g05084 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dac_g07918 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dde_g21267 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dde_g23863 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dde_g24968 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ehy_g01159 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01009796001 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01013420001 XCP1 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01021223001 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10444 No alias protease (Papain) 0.02 OrthoFinder output from all 47 species
Gb_12857 RD21, RD21A Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16999 RD21, RD21A Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
Gb_17130 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
Gb_24406 No alias protease (Papain) 0.03 OrthoFinder output from all 47 species
Gb_31936 RD21, RD21A Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_34744 XBCP3 Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g38450.1 SAG12, LOC_Os06g38450 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38920.1 SAG12, LOC_Os09g38920 Senescence-specific cysteine protease SAG12... 0.03 OrthoFinder output from all 47 species
Len_g48307 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
MA_895155g0010 XBCP3 Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9057282g0010 XCP1 Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g13910.1 XCP1 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g15927 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Msp_g46761 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g02887 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g04414 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ore_g05718 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g09362 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ore_g14179 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g15182 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g16435 CP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Ore_g28669 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g33814 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g33943 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g38388 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g42797 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g42798 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pnu_g13983 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ppi_g10932 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ppi_g32506 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ppi_g42104 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001738 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Sam_g12984 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Solyc01g107760.4.1 Solyc01g107760 Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g076910.3.1 SAG12, Solyc02g076910 protease (Papain) 0.03 OrthoFinder output from all 47 species
Solyc02g076980.5.1.1 Solyc02g076980 Senescence-specific cysteine protease SAG12... 0.03 OrthoFinder output from all 47 species
Solyc02g077040.4.1 Solyc02g077040 Senescence-specific cysteine protease SAG12... 0.04 OrthoFinder output from all 47 species
Solyc03g006200.3.1 SAG12, Solyc03g006200 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc03g111730.3.1 Solyc03g111730 protease (Papain) 0.04 OrthoFinder output from all 47 species
Spa_g18760 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Spa_g29617 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Spa_g39942 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Spa_g42208 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g12119 XBCP3 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Tin_g22886 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g22988 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g25797 XBCP3 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g37188 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g40006 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Zm00001e021466_P001 Zm00001e021466 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e035458_P001 Zm00001e035458 Fruit bromelain OS=Ananas comosus (sp|o23791|brom1_anaco... 0.03 OrthoFinder output from all 47 species
Zm00001e035459_P002 Zm00001e035459 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041898_P001 Zm00001e041898 Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 1 147
IPR000118 Granulin 182 229
No external refs found!