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  5. LOC_Os04g53670.1

LOC_Os04g53670.1 (LOC_Os04g53670)


Aliases : LOC_Os04g53670

Description : no hits & (original description: none)


Gene families : OG0007789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g53670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00072410 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
Aev_g02604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042705 No alias not classified & original description: CDS=627-4181 0.03 OrthoFinder output from all 47 species
Ceric.32G041400.1 Ceric.32G041400 not classified & original description: pacid=50598183... 0.06 OrthoFinder output from all 47 species
Dcu_g08316 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
GSVIVT01014604001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_29280 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g02405 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_115918g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g03850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo101367 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g064080.4.1 Solyc07g064080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g12823 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e041705_P003 Zm00001e041705 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991
protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 2 102
No external refs found!