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  5. LOC_Os04g52710.1

LOC_Os04g52710.1 (IGPD, HISN5A, LOC_Os04g52710)


Aliases : IGPD, HISN5A, LOC_Os04g52710

Description : imidazoleglycerol-phosphate dehydratase


Gene families : OG0004806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52710.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Adi_g080908 IGPD, HISN5A EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00928.t1 IGPD, HISN5A,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12313 IGPD, HISN5A EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G064000.1 IGPD, HISN5A,... EC_4.2 carbon-oxygen lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.37 No alias Amino acid metabolism.biosynthesis.glutamate... 0.01 OrthoFinder output from all 47 species
Cre02.g103850 IGPD, HISN5A Amino acid metabolism.biosynthesis.glutamate... 0.02 OrthoFinder output from all 47 species
Len_g30446 IGPD, HISN5A EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEA Interproscan
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000807 ImidazoleglycerolP_deHydtase 102 245
No external refs found!