1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g51890.1

LOC_Os04g51890.1 (LOC_Os04g51890)


Aliases : LOC_Os04g51890

Description : no hits & (original description: none)


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51890.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264290 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00192620 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00032p00074540 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G75590 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT3G09870 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT4G09530 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT4G34770 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
Aev_g16130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23022.t1 Aspi01Gene23022 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g50317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G072600.1 Ceric.32G072600 not classified & original description: pacid=50597815... 0.03 OrthoFinder output from all 47 species
Dac_g27837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000929001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01015023001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01033868001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_29896 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os06g48850.1 LOC_Os06g48850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g48822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025395 No alias not classified & original description: CDS=1-432 0.02 OrthoFinder output from all 47 species
Sam_g42099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo90204 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g110780.1.1 Solyc01g110780 Auxin-induced protein 15A OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Solyc03g124020.1.1 Solyc03g124020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g045060.1.1 Solyc07g045060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g084010.1.1 Solyc10g084010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g089270.1.1 Solyc12g089270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g53963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009872_P002 Zm00001e009872 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e023114_P001 Zm00001e023114 Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 26 141
No external refs found!