LOC_Os04g48130.1 (ATRBL6, RBL6, LOC_Os04g48130)


Aliases : ATRBL6, RBL6, LOC_Os04g48130

Description : protease (RBL)


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48130.1

Target Alias Description ECC score Gene Family Method Actions
AT1G52580 RBL5, ATRBL5 RHOMBOID-like protein 5 0.02 OrthoFinder output from all 47 species
Ala_g07982 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33530 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39472 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05273.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.53 RBL1, ATRBL1 No description available 0.01 OrthoFinder output from all 47 species
Dde_g01404 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
MA_128457g0010 RBL2, ATRBL2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g05540.1 RBL1, ATRBL1 protease (RBL) 0.03 OrthoFinder output from all 47 species
Msp_g00496 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43400 RBL4, ATRBL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10257 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12850 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005580.4.1 RBL1, ATRBL1,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 130 272
No external refs found!