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  5. LOC_Os04g46910.1

LOC_Os04g46910.1 (ADF7, LOC_Os04g46910)


Aliases : ADF7, LOC_Os04g46910

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46910.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00126220 ADF8,... Cytoskeleton.microfilament network.actin... 0.06 OrthoFinder output from all 47 species
AMTR_s00140p00036970 ADF8,... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
AT1G01750 ADF11 actin depolymerizing factor 11 0.07 OrthoFinder output from all 47 species
AT4G00680 ADF8 actin depolymerizing factor 8 0.05 OrthoFinder output from all 47 species
AT4G25590 ADF7 actin depolymerizing factor 7 0.07 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.09 OrthoFinder output from all 47 species
Adi_g018985 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077743 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080661 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46917 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10466 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28193 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00265 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.05 OrthoFinder output from all 47 species
Cba_g00325 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g339050 ADF11 Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
Dac_g34893 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40769 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016593001 ATADF1, ADF1, atadf Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.1 OrthoFinder output from all 47 species
GSVIVT01027807001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028324001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.12 OrthoFinder output from all 47 species
Gb_02796 ADF6, ATADF6 actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
Len_g28669 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12632 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42530 ADF8 actin-depolymerizing factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g094400.3.1 ADF10, Solyc01g094400 actin-depolymerizing factor 0.05 OrthoFinder output from all 47 species
Solyc01g111380.3.1 ADF5, ATADF5,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Solyc10g017550.4.1 ADF11, Solyc10g017550 actin-depolymerizing factor 0.09 OrthoFinder output from all 47 species
Zm00001e007293_P001 ADF11, Zm00001e007293 actin-depolymerizing factor 0.09 OrthoFinder output from all 47 species
Zm00001e011754_P001 ATADF4, ADF4,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Zm00001e023183_P001 ADF7, Zm00001e023183 actin-depolymerizing factor 0.13 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 14 136
No external refs found!