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  5. LOC_Os04g46850.1

LOC_Os04g46850.1 (LOC_Os04g46850)


Aliases : LOC_Os04g46850

Description : RGF precursor polypeptide


Gene families : OG0002811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46850.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Aev_g13094 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08562 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28374.t1 Aspi01Gene28374 RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48227.t1 Aspi01Gene48227 RGF precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0192.g057042 No alias RGF precursor polypeptide & original description: CDS=1-402 0.05 OrthoFinder output from all 47 species
Ceric.06G008100.1 Ceric.06G008100 RGF precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g18155 No alias RGF precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01091 No alias RGF precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00237 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60859 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29063 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11977 No alias RGF precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!