LOC_Os04g46780.1 (LOC_Os04g46780)


Aliases : LOC_Os04g46780

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46780.1

Target Alias Description ECC score Gene Family Method Actions
AT2G23830 No alias PapD-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g085923 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Adi_g102804 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Adi_g115224 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Dcu_g35384 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
GSVIVT01017816001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os01g71050.1 VAP27-2, LOC_Os01g71050 contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
MA_56506g0010 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Msp_g12102 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Nbi_g06542 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Pir_g24850 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2023.g028239 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Tin_g28738 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e020953_P001 BSK1, Zm00001e020953 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 105
No external refs found!