LOC_Os04g39570.1 (WRKY2, ATWRKY2, LOC_Os04g39570)


Aliases : WRKY2, ATWRKY2, LOC_Os04g39570

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39570.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g10428 WRKY49, ATWRKY49 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25928 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44250 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018300001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
Gb_00547 AtWRKY41, WRKY41 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_17623 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_101135g0010 No alias transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_103616g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Mp4g00200.1 WRKY6, ATWRKY6 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc07g047960.3.1 WRKY1, ZAP1,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Spa_g12510 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 523 579
IPR003657 WRKY_dom 755 812
No external refs found!