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  5. LOC_Os04g30770.1

LOC_Os04g30770.1 (LOC_Os04g30770)


Aliases : LOC_Os04g30770

Description : no description available(sp|a0a072ur65|cht5b_medtr : 146.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 96.2)


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g30770.1

Target Alias Description ECC score Gene Family Method Actions
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.04 OrthoFinder output from all 47 species
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32358 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33209 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09172 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20488 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47068.t1 Aspi01Gene47068 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47069.t1 Aspi01Gene47069 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47070.t1 Aspi01Gene47070 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G011300.1 Ceric.26G011300 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g06816 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47090 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g27400.1 LOC_Os11g27400 no description available(sp|u5n4e3|nfh1_medtr : 191.0) &... 0.06 OrthoFinder output from all 47 species
Len_g55863 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_126635g0010 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.04 OrthoFinder output from all 47 species
MA_31969g0010 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.03 OrthoFinder output from all 47 species
Msp_g37121 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39002 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65217 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo410072 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g40078 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 44 389
No external refs found!