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  5. LOC_Os04g27850.1

LOC_Os04g27850.1 (AT-P4H-1, LOC_Os04g27850)


Aliases : AT-P4H-1, LOC_Os04g27850

Description : prolyl hydroxylase


Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27850.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0065.g035972 No alias prolyl hydroxylase & original description: CDS=282-1178 0.03 OrthoFinder output from all 47 species
Ceric.02G075100.1 Ceric.02G075100 prolyl hydroxylase & original description:... 0.03 OrthoFinder output from all 47 species
Cre05.g245350 No alias Protein degradation.ER-associated protein degradation... 0.01 OrthoFinder output from all 47 species
Cre08.g369300 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
Cre10.g428500 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.01 OrthoFinder output from all 47 species
Dac_g11771 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03204 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21691 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031982_P004 Zm00001e031982 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 150 262
No external refs found!