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  5. LOC_Os04g12010.1

LOC_Os04g12010.1 (LOC_Os04g12010)


Aliases : LOC_Os04g12010

Description : no description available(sp|q10i20|xat3_orysj : 325.0)


Gene families : OG0000905 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g12010.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00157810 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00006p00165990 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00007p00251750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00226p00018460 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G03360 No alias Glycosyltransferase family 61 protein 0.04 OrthoFinder output from all 47 species
AT3G18180 No alias Glycosyltransferase family 61 protein 0.02 OrthoFinder output from all 47 species
Aev_g48291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18470.t1 Aspi01Gene18470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037699001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_18307 No alias no description available(sp|q6zfr0|xat2_orysj : 282.0) 0.03 OrthoFinder output from all 47 species
Gb_35187 No alias no description available(sp|q10i20|xat3_orysj : 257.0) 0.04 OrthoFinder output from all 47 species
LOC_Os01g02900.1 LOC_Os01g02900 no description available(sp|q10i20|xat3_orysj : 446.0) 0.09 OrthoFinder output from all 47 species
LOC_Os01g02940.2 LOC_Os01g02940 no description available(sp|q10i20|xat3_orysj : 352.0) 0.04 OrthoFinder output from all 47 species
LOC_Os02g04250.1 LOC_Os02g04250 no description available(sp|q6zfr0|xat2_orysj : 364.0) 0.05 OrthoFinder output from all 47 species
LOC_Os02g22380.1 LOC_Os02g22380 xylan beta-1,2-xylosyltransferase 0.07 OrthoFinder output from all 47 species
LOC_Os05g32544.1 LOC_Os05g32544 no description available(sp|q10i20|xat3_orysj : 240.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g20570.1 LOC_Os06g20570 no description available(sp|q6zfr0|xat2_orysj : 264.0) 0.03 OrthoFinder output from all 47 species
MA_10434370g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434370g0040 No alias no description available(sp|q10i20|xat3_orysj : 134.0) 0.02 OrthoFinder output from all 47 species
MA_10434370g0050 No alias no description available(sp|q10i20|xat3_orysj : 112.0) 0.02 OrthoFinder output from all 47 species
MA_119799g0010 No alias no description available(sp|q6zfr0|xat2_orysj : 249.0) 0.02 OrthoFinder output from all 47 species
MA_3303602g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_7817816g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g118930.2.1 Solyc03g118930 no description available(sp|q6zfr0|xat2_orysj : 327.0) 0.03 OrthoFinder output from all 47 species
Solyc03g118940.4.1 Solyc03g118940 no description available(sp|q10i20|xat3_orysj : 373.0) 0.04 OrthoFinder output from all 47 species
Solyc10g080010.2.1 Solyc10g080010 no description available(sp|q10i20|xat3_orysj : 268.0) 0.04 OrthoFinder output from all 47 species
Zm00001e002712_P001 Zm00001e002712 no description available(sp|q10i20|xat3_orysj : 297.0) 0.04 OrthoFinder output from all 47 species
Zm00001e013213_P005 Zm00001e013213 no description available(sp|q6zfr0|xat2_orysj : 274.0) 0.03 OrthoFinder output from all 47 species
Zm00001e013428_P003 Zm00001e013428 xylan beta-1,2-xylosyltransferase 0.05 OrthoFinder output from all 47 species
Zm00001e013592_P004 Zm00001e013592 no description available(sp|q6zfr0|xat2_orysj : 294.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017067_P001 Zm00001e017067 no description available(sp|q10i20|xat3_orysj : 280.0) 0.06 OrthoFinder output from all 47 species
Zm00001e017070_P001 Zm00001e017070 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e017072_P001 Zm00001e017072 no description available(sp|q5z8t8|xyxt1_orysj : 301.0) 0.1 OrthoFinder output from all 47 species
Zm00001e017075_P001 Zm00001e017075 no description available(sp|q6zfr0|xat2_orysj : 431.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017188_P001 Zm00001e017188 no description available(sp|q10i20|xat3_orysj : 188.0) 0.02 OrthoFinder output from all 47 species
Zm00001e025332_P001 Zm00001e025332 no description available(sp|q6zfr0|xat2_orysj : 287.0) 0.05 OrthoFinder output from all 47 species
Zm00001e025688_P001 Zm00001e025688 no description available(sp|q10i20|xat3_orysj : 283.0) 0.05 OrthoFinder output from all 47 species
Zm00001e025689_P004 Zm00001e025689 no description available(sp|q5z8t8|xyxt1_orysj : 328.0) 0.03 OrthoFinder output from all 47 species
Zm00001e025690_P001 Zm00001e025690 no description available(sp|q6zfr0|xat2_orysj : 290.0) 0.05 OrthoFinder output from all 47 species
Zm00001e025722_P002 Zm00001e025722 no description available(sp|q5z8t8|xyxt1_orysj : 304.0) 0.02 OrthoFinder output from all 47 species
Zm00001e030705_P001 Zm00001e030705 no description available(sp|q6zfr0|xat2_orysj : 287.0) 0.04 OrthoFinder output from all 47 species
Zm00001e031591_P001 Zm00001e031591 no description available(sp|q10i20|xat3_orysj : 206.0) 0.03 OrthoFinder output from all 47 species
Zm00001e035748_P001 Zm00001e035748 no description available(sp|q10i20|xat3_orysj : 254.0) 0.06 OrthoFinder output from all 47 species
Zm00001e036987_P001 Zm00001e036987 no description available(sp|q6zfr0|xat2_orysj : 306.0) 0.04 OrthoFinder output from all 47 species
Zm00001e037010_P003 Zm00001e037010 xylan beta-1,2-xylosyltransferase 0.08 OrthoFinder output from all 47 species
Zm00001e037071_P001 Zm00001e037071 no description available(sp|q10i20|xat3_orysj : 301.0) 0.06 OrthoFinder output from all 47 species
Zm00001e037072_P001 Zm00001e037072 no description available(sp|q6zfr0|xat2_orysj : 303.0) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007657 Glycosyltransferase_61 260 466
No external refs found!