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  5. LOC_Os04g01810.1

LOC_Os04g01810.1 (TPS02, LOC_Os04g01810)


Aliases : TPS02, LOC_Os04g01810

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0000499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os04g01810.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00255250 TPS02,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Aop_g45986 ATTPS21, TPS21 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014175001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01036340001 No alias Secondary metabolism.terpenoids.terpenoid... 0.07 OrthoFinder output from all 47 species
GSVIVT01036373001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_16024 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10430954g0010 ATTPS14, TPS14 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc12g006570.2.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Zm00001e004158_P002 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Zm00001e008618_P001 Zm00001e008618 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 242 402
IPR005630 Terpene_synthase_metal-bd 403 440
IPR001906 Terpene_synth_N 47 211
No external refs found!