Heatmap: Cluster_154 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g03310.1 (LOC_Os01g03310)
-8.36 -1.64 -6.47 - -13.43 - -0.75 -0.17 -1.37 -4.51 -5.37 -4.67 1.27 1.35 -2.69 -1.49 -8.94 -2.07 -7.97 1.23 -1.14 -0.87 -0.22 -0.35 -1.13 1.12 -0.41 -0.7 -0.38 1.68 0.35 0.31 -0.53 0.8 0.57 0.26 -0.94 1.92 2.31 1.34 0.88 1.41 0.04 1.53 -8.03 -2.67 -7.7 -10.21 -10.63
-7.49 -3.56 - - - - -4.23 -3.18 -6.17 -5.76 -3.06 0.18 0.8 -0.73 2.06 2.55 -4.17 -1.27 - 1.93 0.22 -5.64 0.09 -2.17 - -0.75 -0.65 -0.22 -0.39 -0.6 -0.93 -0.45 -0.28 -2.1 -0.79 -0.53 -0.63 -0.14 -0.01 -0.42 -0.67 0.96 0.92 2.02 2.75 1.43 - - -
-6.5 -4.83 - - -8.08 -5.17 -4.98 -3.93 -8.59 -5.75 -3.96 -0.15 0.81 -0.96 2.33 2.66 -4.06 -0.54 - 1.55 0.4 -7.13 0.3 -2.25 -5.87 -1.13 -1.13 -0.44 -0.5 -0.41 -0.54 -0.49 -0.32 -1.67 -0.68 -0.44 -0.19 0.29 -0.13 -0.38 -0.64 1.3 1.01 2.18 2.33 1.2 - - -
-4.14 -1.6 - -2.98 0.53 -4.28 -3.82 -5.29 - -7.12 -6.0 0.38 2.28 -1.6 1.28 1.74 -4.02 -1.34 - 1.11 -0.23 - -0.02 -2.94 - -0.03 -3.79 -0.63 -0.11 -2.03 -1.35 -0.41 -1.0 -1.59 -1.21 -0.53 -0.37 -1.15 -1.35 0.07 0.28 1.41 1.35 3.18 2.34 -0.21 - - -
LOC_Os01g26310.1 (LOC_Os01g26310)
-4.1 -0.66 - - - - -3.21 -4.42 - -2.38 -6.81 -3.77 2.83 -0.18 -1.78 - - -0.03 - 1.14 0.6 -4.56 0.45 -4.86 - - -3.37 0.25 0.56 0.61 -0.9 -0.22 0.51 -1.14 -0.65 -0.61 -0.54 0.65 -0.53 0.43 0.14 1.96 1.99 3.5 - -3.67 - - -
LOC_Os01g58100.1 (LOC_Os01g58100)
-7.66 -2.47 - -5.6 -4.17 -5.77 -5.5 -8.78 -3.74 -5.23 -4.23 -6.86 -1.2 2.72 -6.04 -4.42 -6.01 -0.57 - -0.96 -0.78 -3.14 1.15 -3.32 0.16 -1.12 -5.74 -1.46 -1.21 -0.78 -1.02 -0.57 0.67 -0.77 -2.06 -3.27 -2.44 -0.58 -1.17 3.46 1.6 3.38 1.95 -0.97 - -1.03 - - -
-4.21 -2.38 -3.88 -2.84 -4.35 -1.06 0.63 -1.94 -4.88 -4.99 -4.12 1.17 2.15 1.71 0.52 0.88 -3.77 0.48 - -0.1 -2.05 -1.21 0.52 0.07 -2.66 -1.45 -2.67 -2.45 -1.73 0.01 -1.26 -2.54 -2.21 -1.09 -3.01 -3.12 -3.62 -0.94 -2.03 2.33 1.63 1.86 1.61 2.03 -0.4 1.58 -5.47 -5.92 -5.06
LOC_Os02g16060.1 (LOC_Os02g16060)
-7.71 -1.85 -5.44 -8.15 - - -4.49 -3.11 -5.37 -3.84 -2.25 -1.1 2.66 0.92 - - -2.83 0.69 - 1.71 -0.22 -7.19 -0.29 -6.54 -0.87 - - 0.22 -1.27 -0.73 -0.65 0.2 -0.25 -1.73 -1.01 -0.73 -0.87 0.07 -0.67 0.64 0.95 1.63 2.05 3.1 1.43 0.85 -4.88 - -
LOC_Os02g16070.1 (LOC_Os02g16070)
-1.83 -0.28 -2.98 - - - -2.89 -5.73 -2.53 -4.76 -6.0 -2.27 3.25 0.62 - - -2.29 1.34 0.92 2.43 -1.28 -4.54 -1.18 -3.68 -1.33 -2.63 -2.67 -1.93 -0.74 -1.15 -1.6 -1.04 -1.06 -2.11 -1.6 -2.5 -1.5 -0.2 -2.7 0.16 0.4 1.31 1.46 3.44 -0.07 -2.17 - - -
LOC_Os02g17730.1 (LOC_Os02g17730)
- -0.96 - -3.77 -0.69 1.22 0.31 1.67 - -0.09 -1.62 0.31 2.46 1.22 - - -4.7 0.21 - 1.78 -0.56 -4.26 -3.25 - - - - - - -0.31 - -2.34 -1.38 - - - - -1.66 -1.61 0.13 0.52 2.17 1.99 3.61 - - - - -
-4.66 -1.88 -4.32 -7.19 -6.66 -5.51 -1.51 -1.6 -3.57 -2.41 -4.56 -3.11 0.32 -0.87 -2.77 -1.23 -4.14 -1.0 - 2.2 -0.76 -5.04 -0.3 -4.92 -1.09 -2.58 -3.04 -0.85 -0.83 -0.94 -1.69 -0.96 -2.04 -2.2 -1.66 -1.69 -0.93 -1.02 -1.67 1.49 1.36 2.92 2.83 3.59 -2.13 -2.52 -1.58 -3.91 -5.65
-6.86 -3.32 - - - - -5.31 -4.62 -2.56 -0.68 -1.42 3.08 -0.88 -2.8 1.64 0.07 -5.59 -0.2 - -6.78 1.64 -1.46 0.75 -3.88 - -3.07 - -0.19 0.43 1.05 0.1 1.82 1.83 -0.43 0.45 1.31 0.9 1.21 1.28 -1.39 -2.09 0.79 1.07 - -6.36 -5.2 - - -
LOC_Os04g10924.1 (LOC_Os04g10924)
-6.85 -3.04 - -8.04 -6.53 -3.56 -1.27 0.02 -7.43 -4.0 -4.74 1.2 -2.38 0.3 3.39 2.61 -1.71 0.59 -0.46 2.14 -1.36 -0.13 -0.44 -2.88 -4.61 2.33 0.43 -1.48 -1.34 -1.48 -2.48 -1.57 -1.54 -2.41 -3.06 -2.11 -2.27 -3.18 -2.4 -0.88 0.36 0.74 1.18 1.37 - -5.53 -5.36 - -
LOC_Os05g29820.1 (LOC_Os05g29820)
-0.66 2.55 -0.82 0.08 -1.53 3.02 0.12 0.7 0.68 - -0.86 -1.07 3.17 -0.06 - - 0.99 0.51 - 1.41 -3.53 -3.65 0.09 -1.18 - 1.22 -0.63 - - - -2.31 -2.01 - - - - -1.92 - - -3.54 -4.01 -1.66 -1.67 1.28 -1.03 - 0.42 -1.43 -1.56
LOC_Os06g03180.1 (LOC_Os06g03180)
3.16 1.68 -1.11 -1.03 -2.45 -0.18 -0.27 -0.2 -0.07 -2.75 -2.15 -2.83 1.33 1.91 -1.66 -2.95 3.33 0.47 2.75 -0.86 -5.86 -6.12 1.46 -2.3 -4.61 -3.57 -2.93 - - -3.69 - -5.32 - - - - -5.47 - - -3.63 -6.79 -2.42 -1.65 -1.54 -0.85 -0.2 -2.58 -2.99 -2.62
LOC_Os06g12455.1 (LOC_Os06g12455)
-3.87 -1.13 -0.52 - - -2.43 -1.96 - - -2.87 -2.65 1.51 -2.95 2.38 0.5 -0.48 -0.97 -0.99 - 1.47 -1.62 1.95 0.25 0.73 - 2.05 -0.22 - - - - -2.53 - - - - - 0.57 - 2.62 1.26 2.23 1.25 1.59 - -0.67 - - -
-3.26 0.49 - - 2.24 -2.84 -0.6 - -3.65 - -4.65 -3.51 1.07 2.27 - - - 1.4 - - 0.14 -5.13 2.51 -4.24 - - - - -3.11 -2.82 - -2.11 2.42 1.6 0.02 -0.75 0.18 -2.54 - 0.49 -1.66 2.98 1.38 - - 0.39 - - -
LOC_Os06g13460.1 (LOC_Os06g13460)
-5.0 -1.96 -6.91 -6.75 - - 1.82 2.13 1.51 -4.51 -4.06 3.84 -2.78 -0.28 -0.97 -2.25 -7.67 -0.82 - -3.86 -0.61 -2.93 -1.95 -2.59 - 1.0 -0.99 -0.67 -0.99 -1.29 -0.77 -0.43 0.14 -2.41 -1.37 -2.1 -1.77 -1.26 -1.28 -0.31 -1.6 2.5 1.91 -5.42 -0.03 -4.63 - - -
-3.3 0.76 -4.51 -4.13 -4.16 1.9 -2.0 -1.67 -1.73 -4.25 -3.07 1.46 -0.06 0.26 - - -3.68 0.27 - -0.16 -1.61 -3.64 -0.12 -3.79 - -3.61 - -1.29 0.48 0.46 -0.56 -1.57 -0.79 -1.49 -0.15 0.05 -1.2 0.23 -1.41 2.24 0.69 2.58 2.3 1.38 0.51 0.42 0.94 -2.91 -
LOC_Os07g14470.1 (LOC_Os07g14470)
-1.17 4.89 - - - - - - - - -3.54 - - - - - - - - - - - 3.6 - - - - - - - - - - - - - - - - 1.34 - - 1.51 0.35 - - - - -
LOC_Os07g15970.1 (LOC_Os07g15970)
-0.78 0.4 -2.1 - -2.68 -0.42 - -4.17 1.22 - -4.0 1.12 -0.32 1.1 - -0.78 -1.3 -0.8 - 0.89 -2.14 -1.32 -1.2 -0.92 -0.67 -0.62 -1.15 - - - - -2.78 - - 0.5 - - - - 3.41 1.24 2.63 1.35 2.52 -1.41 0.76 - -0.77 -
LOC_Os07g34240.1 (LOC_Os07g34240)
-5.22 1.89 - - -1.99 - - -1.49 -0.99 - -3.94 -1.47 -1.97 - - -0.21 -0.04 -2.17 - -6.12 1.0 0.59 2.87 0.29 -0.06 - - -1.12 2.19 1.5 2.01 0.04 - - - -0.37 - - - 1.85 0.96 2.68 1.46 - - - - - -
LOC_Os07g42030.1 (LOC_Os07g42030)
-6.49 -1.71 - - - - -5.01 -4.01 - - -6.17 -3.35 -3.23 - 2.67 2.43 - -3.46 - 0.21 -0.22 -7.06 -3.86 -5.34 - -0.66 - 0.84 -0.59 -0.51 -1.56 -1.27 -3.33 -1.91 -3.3 -0.37 -0.38 -0.67 -0.63 1.23 1.12 3.43 3.05 0.31 -0.28 -0.14 - - -
-0.24 1.14 -0.15 -4.62 -3.73 -0.64 -0.21 -0.23 -1.2 -1.76 -0.8 1.53 2.02 1.91 -1.99 -1.87 1.11 0.54 -2.65 1.05 -0.93 -3.41 -0.06 -3.89 0.13 -1.52 -1.13 -1.39 -0.93 -0.66 -0.86 -1.01 -1.12 -2.0 -1.74 -1.19 -0.84 -0.96 -0.97 0.06 0.17 1.24 1.31 2.44 -1.15 -0.44 -1.11 -1.88 -0.54
LOC_Os08g07080.1 (LOC_Os08g07080)
-10.46 -2.21 - - - -5.06 -2.58 -3.83 -3.06 -7.24 -7.05 -3.23 -3.67 0.87 -2.35 -1.66 -8.95 -1.07 - 2.04 -2.49 1.76 0.74 0.49 -4.61 -1.07 -4.56 -3.18 -2.19 -2.95 -2.8 -5.4 -0.6 -2.46 -3.69 -3.75 -3.56 -3.43 -4.21 3.09 1.75 3.58 2.95 -0.94 -7.61 -2.98 - - -
LOC_Os08g07090.1 (LOC_Os08g07090)
0.46 2.82 - -0.99 - - - - 0.28 -2.4 -2.78 - - 3.66 - - - 0.8 - -3.43 - -0.94 - -2.94 - - - - - - - - - - - - - - - 2.24 0.21 2.58 2.36 2.68 - - - - -
LOC_Os08g07100.1 (LOC_Os08g07100)
-9.46 -2.76 - - -6.7 -1.56 0.27 -3.89 -3.63 -4.86 -3.66 -0.59 -3.21 1.47 - -3.71 - 0.18 - -0.73 -1.31 0.07 4.31 0.02 - -5.49 - -2.46 -1.73 -0.75 -0.83 -2.04 0.57 -0.08 -3.73 -4.8 -3.53 -2.04 -3.73 2.05 0.56 2.22 1.08 -0.26 -4.34 0.24 - - -
LOC_Os08g24480.1 (LOC_Os08g24480)
-0.87 -0.67 -2.63 - -7.72 -2.13 -1.88 -1.4 -3.4 -1.44 -1.48 -1.73 -0.62 1.54 - - -1.68 1.71 -2.26 1.15 -5.04 -4.02 0.02 -3.19 -1.82 -0.89 -2.45 - -3.58 -5.12 -4.38 -2.85 -1.16 -3.08 - -4.13 - -2.59 -2.26 2.03 -0.08 1.35 -1.35 3.81 1.76 2.84 -5.4 - -
LOC_Os08g29740.1 (LOC_Os08g29740)
2.19 3.3 2.51 - - - 1.98 1.59 1.15 -2.8 1.67 0.47 - 0.64 - - - -0.71 - 0.72 -0.97 - 1.47 - - - 0.46 - - 0.9 - - 0.9 - - - - - - -2.84 -1.67 - -1.24 -3.25 - - - - 0.84
LOC_Os09g19229.1 (LOC_Os09g19229)
-6.1 -2.73 - - - - -2.44 -0.97 -6.68 -5.34 -5.64 -1.66 3.18 -1.38 - - -7.9 -1.78 - 1.13 0.64 -7.26 0.08 -6.4 -0.79 -7.23 - -0.81 -1.07 0.12 -0.18 -0.56 -0.95 -1.23 -0.51 0.49 0.45 -0.02 0.36 1.22 0.61 3.26 2.76 0.78 -3.23 -2.59 - - -
LOC_Os11g29980.1 (LOC_Os11g29980)
-0.53 1.0 -4.78 - -0.64 - -3.03 -0.87 -4.38 - -1.4 1.36 -0.22 -1.61 -1.5 -0.45 -0.58 -0.86 4.69 0.09 -5.08 -2.24 0.85 -1.76 - -0.5 0.02 - - -2.38 - 0.05 - - - - - - - -5.12 -4.75 -3.47 -3.23 -1.2 -0.32 1.77 - - 0.51
LOC_Os11g33450.1 (LOC_Os11g33450)
-6.16 -0.63 -2.33 -4.18 - 0.09 - - - -6.28 0.27 2.09 - - 0.33 -0.06 -4.18 -3.55 - -4.12 0.99 -5.01 0.2 -5.05 - -0.52 -0.67 0.35 1.11 2.08 0.24 1.31 1.14 1.28 -1.61 -0.03 0.05 0.28 0.05 -0.2 1.72 1.08 2.59 -1.64 -2.19 0.27 - - -
-4.96 -0.46 - -5.2 - - -2.55 -3.9 -5.62 -3.96 -2.72 -2.06 0.01 -0.47 0.73 1.62 -7.34 -1.37 - 2.94 -1.34 -4.46 -0.07 -3.46 -0.58 0.05 -1.02 -2.63 - -2.87 -3.78 -2.28 -1.01 -3.34 -2.53 -0.55 0.43 -0.5 -0.04 1.78 0.93 2.26 2.92 2.66 - -2.18 - - -
LOC_Os11g35980.1 (LOC_Os11g35980)
-6.98 -1.67 - - - - -3.09 -2.3 - - -4.88 -0.26 3.17 1.08 - - - 0.23 - 0.77 0.46 0.22 0.45 -2.37 -0.9 - - 1.02 -0.67 -0.18 -0.18 -0.22 0.69 -0.29 -0.05 0.49 1.05 1.08 0.85 0.32 -0.34 0.99 1.22 2.69 - - - - -
0.58 0.68 0.85 - - -0.9 - - 3.25 - -2.58 1.8 -0.9 - 0.99 1.6 -2.96 0.18 - 0.38 -0.71 -0.89 1.39 -1.29 0.13 0.11 0.68 - - -0.03 - 0.26 - - - -1.14 - -0.38 -0.33 -1.34 -2.44 -0.83 0.48 - 1.15 2.43 - - -
LOC_Os11g37800.1 (LOC_Os11g37800)
-2.36 4.0 - 1.91 1.42 2.47 - -2.21 - - -1.0 - - - - - - - - -5.94 1.32 - 1.7 - - - - - 1.95 0.99 - 2.45 - - - - - - - -2.23 -1.47 - 1.28 - - - - - -
LOC_Os11g38610.2 (LOC_Os11g38610)
1.68 1.24 0.75 0.06 -1.64 1.49 0.45 0.97 2.63 0.5 0.54 0.54 1.38 2.53 -4.53 -1.97 1.79 -1.43 2.19 -1.01 -4.37 -5.54 -1.64 -5.77 -3.37 -0.81 0.07 -4.68 -4.89 -3.79 -5.75 -3.19 -5.96 -7.14 -7.58 -3.65 -4.94 -3.51 -4.43 -4.27 -3.81 -3.56 -2.23 -4.93 -2.85 -2.89 -0.93 0.22 0.14
-2.99 1.82 - - - - -4.96 -4.44 -1.25 -4.44 -0.99 0.88 1.52 2.26 -0.35 -1.18 -2.25 1.79 - 2.57 -2.42 0.08 -0.56 -0.13 -2.36 2.34 -0.9 -2.02 -1.71 -1.95 -3.27 - -2.02 - -2.51 -2.77 - -3.85 -3.22 1.95 0.87 1.81 0.4 0.06 -4.16 1.04 - - -
-3.93 0.19 -2.16 -1.86 -3.97 1.47 2.08 1.67 -1.42 -1.63 -0.73 -0.55 0.44 2.41 - - -1.87 -0.77 - 1.6 -4.59 -5.11 -0.18 -4.32 0.37 -2.52 2.19 - -4.25 - -4.12 -1.92 -0.81 -3.79 -2.45 -2.64 -4.29 - -2.52 1.86 -0.31 0.85 -1.47 2.14 1.17 0.22 -1.91 -1.26 -0.31
LOC_Os12g14440.1 (LOC_Os12g14440)
-4.64 -0.48 -8.8 -11.37 -9.26 -5.11 -2.01 -6.38 -3.3 -5.67 -7.36 1.16 0.31 -0.2 - - -8.45 -1.89 - 1.47 -1.26 -0.91 0.58 -4.85 -4.25 -0.78 -3.17 -3.73 -1.28 -2.53 -2.93 -2.46 1.34 1.52 -2.55 -2.09 -3.85 -0.27 -5.24 3.31 1.09 2.28 0.18 3.51 -7.71 -3.69 -8.81 - -
LOC_Os12g27220.1 (LOC_Os12g27220)
-6.04 -2.65 -5.16 - -6.08 -0.0 -4.46 -5.21 -3.44 -4.89 -4.64 -5.22 0.47 3.97 - - -4.93 0.4 - 0.22 -2.49 -3.65 1.38 -5.9 - -2.49 -4.43 - -2.99 -0.26 -1.28 -7.17 -2.39 -3.53 -5.93 -2.11 -3.14 -0.78 -5.74 2.4 2.09 3.19 0.55 0.57 -5.53 -0.69 - - -
LOC_Os12g27254.1 (LOC_Os12g27254)
-4.53 -2.09 - - - - - - -4.59 -8.16 -8.64 -2.63 -1.55 3.11 - - -8.06 -5.39 - 1.84 -3.08 -8.39 0.74 -5.53 - -1.14 -2.85 -4.7 - -2.46 -3.04 - -1.65 - -3.63 -1.92 -1.61 0.52 -3.49 2.05 2.47 3.48 0.91 2.08 0.84 0.92 - - -
-5.83 0.77 -7.88 -2.17 -4.14 -8.37 -0.2 -1.06 -5.47 -3.6 -4.89 -3.1 0.94 2.55 -1.31 -0.96 -7.33 -0.55 - 1.65 -1.85 -4.49 0.08 -2.35 0.74 2.01 -0.99 -2.17 -1.66 -1.18 -1.75 -1.28 0.38 -0.08 -1.99 -2.32 -2.32 -1.78 -2.59 2.82 1.2 2.32 0.38 2.05 -10.56 -2.08 - - -
-4.5 -0.82 -5.07 -4.99 -5.44 -0.61 -0.57 -0.34 -4.32 -3.73 -6.56 -2.65 -3.26 -0.27 - - -8.06 -0.85 - -2.35 1.02 -1.8 2.0 -3.75 -3.6 2.45 -1.27 0.65 0.55 2.06 1.41 1.35 1.89 1.06 -2.49 -2.47 -2.25 -3.97 -2.73 3.23 0.41 0.04 -1.38 -3.65 - -0.53 - - -
-0.63 -0.55 -0.75 -4.72 -5.62 -1.57 1.51 1.02 -0.82 -1.64 -1.84 0.26 -1.48 -0.83 0.97 1.42 0.73 1.12 -2.68 1.0 -0.01 -0.11 -0.25 -0.27 0.45 0.69 1.96 -0.65 -1.08 -1.89 -2.13 -1.1 -1.32 -3.29 -2.41 -1.5 -1.49 -0.14 0.14 0.58 -0.34 1.41 0.85 1.69 -2.09 -2.26 -1.7 -0.91 -0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.