1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g63970.1

LOC_Os03g63970.1 (GA5, GA20OX1,...)


Aliases : GA5, GA20OX1, ATGA20OX1, AT2301, LOC_Os03g63970

Description : gibberellin 20-oxidase


Gene families : OG0003609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003609_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63970.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G44090 ATGA20OX5, GA20OX5 gibberellin 20-oxidase 5 0.03 OrthoFinder output from all 47 species
AT5G07200 ATGA20OX3,... gibberellin 20-oxidase 3 0.05 OrthoFinder output from all 47 species
Adi_g009762 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Ala_g21895 ATGA20OX3,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01027572001 GA5, GA20OX1,... Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.04 OrthoFinder output from all 47 species
Lfl_g26669 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Msp_g06954 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Ore_g27731 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.05 OrthoFinder output from all 47 species
Ore_g27736 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Pnu_g05556 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Pnu_g23645 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024341 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Solyc01g093980.3.1 ATGA20OX3,... gibberellin 20-oxidase 0.03 OrthoFinder output from all 47 species
Solyc03g006880.3.1 GA5, GA20OX1,... gibberellin 20-oxidase 0.07 OrthoFinder output from all 47 species
Solyc11g072310.2.1 GA5, GA20OX1,... gibberellin 20-oxidase 0.02 OrthoFinder output from all 47 species
Zm00001e011473_P001 ATGA20OX2,... gibberellin 20-oxidase 0.03 OrthoFinder output from all 47 species
Zm00001e028601_P001 GA5, GA20OX1,... gibberellin 20-oxidase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 211 309
IPR026992 DIOX_N 48 145
No external refs found!