LOC_Os03g63750.1 (HSFA1B, ATHSF3, HSF3,...)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B, LOC_Os03g63750

Description : transcription factor (HSF). transcriptional regulator (HsfA1)


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63750.1

Target Alias Description ECC score Gene Family Method Actions
Dac_g11746 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013107001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.06 OrthoFinder output from all 47 species
Gb_15358 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 OrthoFinder output from all 47 species
Lfl_g07776 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MpVg00470.1 HSFA1B, ATHSF3,... No annotation 0.05 OrthoFinder output from all 47 species
Nbi_g03550 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g059520.3.1 HSFA8, AT-HSFA8,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Tin_g19500 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e005982_P001 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e014699_P003 HSFA3, AT-HSFA3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 38 127
No external refs found!