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  5. LOC_Os03g61050.1

LOC_Os03g61050.1 (DEX1, LOC_Os03g61050)


Aliases : DEX1, LOC_Os03g61050

Description : exine patterning factor (DEX1)


Gene families : OG0004786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61050.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00208280 DEX1,... Cell wall.sporopollenin.exine wall formation.DEX1 exine... 0.04 OrthoFinder output from all 47 species
AT3G09090 DEX1 defective in exine formation protein (DEX1) 0.07 OrthoFinder output from all 47 species
Adi_g054746 DEX1 exine patterning factor *(DEX1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11052 DEX1 exine patterning factor *(DEX1) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15860 DEX1 exine patterning factor *(DEX1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007446 DEX1 exine patterning factor *(DEX1) & original description:... 0.04 OrthoFinder output from all 47 species
Cre04.g214097 DEX1 Cell wall.sporopollenin.exine wall formation.DEX1 exine... 0.05 OrthoFinder output from all 47 species
Gb_30710 DEX1 exine patterning factor (DEX1) 0.03 OrthoFinder output from all 47 species
Len_g08492 DEX1 exine patterning factor *(DEX1) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g00230.1 DEX1 exine patterning factor (DEX1) 0.02 OrthoFinder output from all 47 species
Msp_g15943 DEX1 exine patterning factor *(DEX1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06289 DEX1 exine patterning factor *(DEX1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g013130.3.1 DEX1, Solyc09g013130 exine patterning factor (DEX1) 0.02 OrthoFinder output from all 47 species
Zm00001e006225_P002 DEX1, Zm00001e006225 exine patterning factor (DEX1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030173 obsolete integral component of Golgi membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA

No InterPro domains available for this sequence

No external refs found!