LOC_Os03g57520.1 (LOC_Os03g57520)


Aliases : LOC_Os03g57520

Description : no hits & (original description: none)


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57520.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00151900 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00243080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00143350 MKS1,... No description available 0.05 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g081270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22625 MKS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00571.t1 Aspi01Gene00571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01180.t1 Aspi01Gene01180 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09531.t1 MKS1, Aspi01Gene09531 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09533.t1 MKS1, Aspi01Gene09533 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36394.t1 Aspi01Gene36394 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G035900.1 Ceric.33G035900 not classified & original description: pacid=50607042... 0.02 OrthoFinder output from all 47 species
Dac_g01989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_01280 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_41426 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g33600.1 MKS1, LOC_Os02g33600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g34050.1 LOC_Os04g34050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g06750.1 LOC_Os07g06750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g39381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27183g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_3573g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_6029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_838428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87081g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp5g23540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g19743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003706 No alias not classified & original description: CDS=1-714 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004079 No alias not classified & original description: CDS=1-978 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016057 No alias not classified & original description: CDS=1-810 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s2220.g028295 No alias not classified & original description: CDS=1-810 0.05 OrthoFinder output from all 47 species
Spa_g49034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002417_P001 Zm00001e002417 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 60 85
No external refs found!