LOC_Os03g55164.1 (LOC_Os03g55164)

Aliases : LOC_Os03g55164

Description : ATP synthase complex assembly factor (BFA1). transcription factor (WRKY)

Gene families : OG0007452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007452_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g55164.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00093170	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT3G29185	No alias	Domain of unknown function (DUF3598)	0.09	OrthoFinder output from all 47 species
Aev_g03811	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g14293	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.04	OrthoFinder output from all 47 species
Dde_g12316	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.02	OrthoFinder output from all 47 species
Gb_30961	No alias	ATP synthase complex assembly factor (BFA1)	0.03	OrthoFinder output from all 47 species
Lfl_g38454	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.03	OrthoFinder output from all 47 species
MA_10436240g0010	No alias	ATP synthase complex assembly factor (BFA1)	0.04	OrthoFinder output from all 47 species
MA_31719g0010	No alias	ATP synthase complex assembly factor (BFA1)	0.03	OrthoFinder output from all 47 species
Mp2g08580.1	No alias	ATP synthase complex assembly factor (BFA1)	0.04	OrthoFinder output from all 47 species
Msp_g09453	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g14143	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.03	OrthoFinder output from all 47 species
Ore_g36767	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g32946	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023043	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.05	OrthoFinder output from all 47 species
Sam_g17200	No alias	ATP synthase complex assembly factor *(BFA1) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e005742_P004	Zm00001e005742	ATP synthase complex assembly factor (BFA1)	0.05	OrthoFinder output from all 47 species
Zm00001e012006_P002	Zm00001e012006	ATP synthase complex assembly factor (BFA1)	0.15	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022017	DUF3598_BFA1-like	257	438
IPR003657	WRKY_dom	903	960
IPR003657	WRKY_dom	757	813

External Links

No external refs found!

LOC_Os03g55164.1 (LOC_Os03g55164)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation