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  5. LOC_Os03g53860.1

LOC_Os03g53860.1 (LOC_Os03g53860)


Aliases : LOC_Os03g53860

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 212.5) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia (sp|a5jtq3|xyl2_medsv : 143.0)


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53860.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00127950 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00216320 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AT3G47010 No alias Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT3G62710 No alias Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
Aev_g18342 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37889 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08816 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47838 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01873 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g35160 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01818 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10747 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09258.t1 Aspi01Gene09258 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58862.t1 Aspi01Gene58862 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007597 No alias EC_3.2 glycosylase & original description: CDS=1-1590 0.03 OrthoFinder output from all 47 species
Azfi_s1035.g095886 No alias EC_3.2 glycosylase & original description: CDS=217-2184 0.02 OrthoFinder output from all 47 species
Azfi_s1903.g107957 No alias EC_3.2 glycosylase & original description: CDS=887-1975 0.02 OrthoFinder output from all 47 species
Cba_g03937 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13685 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.23G080000.1 Ceric.23G080000 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21660 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06336 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36334 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13162 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24440 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28794 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037543001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Gb_05179 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53790.1 LOC_Os03g53790 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Len_g13293 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46571 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50821 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Msp_g01656 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02210 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13297 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29758 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g22403 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_23400V3.1 Pp3c4_23400 Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ppi_g10831 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15177 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15636 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012087 No alias EC_3.2 glycosylase & original description: CDS=236-2119 0.03 OrthoFinder output from all 47 species
Smo157260 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
Spa_g11244 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29416 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10661 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005676_P010 Zm00001e005676 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Zm00001e025311_P002 Zm00001e025311 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 69 397
IPR002772 Glyco_hydro_3_C 434 642
No external refs found!