- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : FIP1, LOC_Os03g52670
Description : GLABRA2 expression modulator OS=Arabidopsis thaliana (sp|q8s8f8|gem_arath : 209.0)
Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00120390 | evm_27.TU.AmTr_v1... | GEM-like protein 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT4G01600 | No alias | GRAM domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G08350 | No alias | GRAM domain-containing protein / ABA-responsive protein-related | 0.06 | OrthoFinder output from all 47 species | |
| AT5G13200 | No alias | GRAM domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G23350 | No alias | GRAM domain-containing protein / ABA-responsive protein-related | 0.05 | OrthoFinder output from all 47 species | |
| AT5G23360 | No alias | GRAM domain-containing protein / ABA-responsive protein-related | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g006517 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g018708 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074306 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g105752 | FIP1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g116978 | FIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11767 | GEM | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g36046 | FIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07158 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g035086 | FIP1 | not classified & original description: CDS=109-939 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G029100.1 | FIP1, Ceric.15G029100 | not classified & original description: pacid=50640139... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G044500.1 | FIP1, Ceric.32G044500 | not classified & original description: pacid=50597787... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000958001 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_22682 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g44510.1 | LOC_Os04g44510 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g29400.1 | LOC_Os12g29400 | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08110 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g14603 | GEM | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23716 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g45212 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10113221g0010 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10255128g0010 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434405g0010 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g17580.1 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07508 | FIP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00416 | FIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo85701 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g009760.3.1 | Solyc01g009760 | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g098660.3.1 | Solyc03g098660 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g078510.3.1 | Solyc08g078510 | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g011590.2.1 | Solyc11g011590 | Putative GEM-like protein 8 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05448 | FIP1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g05449 | FIP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g20230 | FIP1 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e000650_P001 | FIP1, Zm00001e000650 | GLABRA2 expression modulator OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015212_P001 | Zm00001e015212 | GEM-like protein 6 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023068_P001 | Zm00001e023068 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e039556_P001 | Zm00001e039556 | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041280_P002 | Zm00001e041280 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e041281_P001 | Zm00001e041281 | Putative GEM-like protein 8 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004182 | GRAM | 119 | 245 |
| No external refs found! |