1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g43020.1

LOC_Os03g43020.1 (PFD4, AIP3, LOC_Os03g43020)


Aliases : PFD4, AIP3, LOC_Os03g43020

Description : component PFD4 of Prefoldin co-chaperone complex


Gene families : OG0005350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005350_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265480 PFD4, AIP3,... Cytoskeleton.actin and tubulin folding.Prefoldin... 0.05 OrthoFinder output from all 47 species
Aob_g06226 PFD4, AIP3 component *(PFD4) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.2 PFD4, AIP3 Cytoskeleton.actin and tubulin folding.Prefoldin... 0.03 OrthoFinder output from all 47 species
Cre16.g671750 PFD4, AIP3 Cytoskeleton.actin and tubulin folding.Prefoldin... 0.02 OrthoFinder output from all 47 species
Len_g00101 PFD4, AIP3 component *(PFD4) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g33852 PFD4, AIP3 component *(PFD4) of Prefoldin co-chaperone complex &... 0.02 OrthoFinder output from all 47 species
MA_10433612g0010 PFD4, AIP3 component PFD4 of Prefoldin co-chaperone complex 0.03 OrthoFinder output from all 47 species
Mp2g17400.1 PFD4, AIP3 component PFD4 of Prefoldin co-chaperone complex 0.03 OrthoFinder output from all 47 species
Msp_g46956 PFD4, AIP3 component *(PFD4) of Prefoldin co-chaperone complex &... 0.04 OrthoFinder output from all 47 species
Pp3c16_6640V3.1 PFD4, AIP3, Pp3c16_6640 ABI3-interacting protein 3 0.02 OrthoFinder output from all 47 species
Solyc01g097300.4.1 PFD4, AIP3,... component PFD4 of Prefoldin co-chaperone complex 0.06 OrthoFinder output from all 47 species
Zm00001e005077_P001 PFD4, AIP3,... component PFD4 of Prefoldin co-chaperone complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
CC GO:0016272 prefoldin complex IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 16 119
No external refs found!