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  5. LOC_Os03g42320.1

LOC_Os03g42320.1 (ATSLY1, LOC_Os03g42320)


Aliases : ATSLY1, LOC_Os03g42320

Description : SEC1 family transport protein SLY1 OS=Oryza sativa subsp. japonica (sp|q851w1|sly1_orysj : 1125.0)


Gene families : OG0004244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42320.1

Target Alias Description ECC score Gene Family Method Actions
Als_g04419 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07437 ATSLY1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08101.t1 ATSLY1, Aspi01Gene08101 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G038700.1 ATSLY1, Ceric.09G038700 not classified & original description: pacid=50588187... 0.03 OrthoFinder output from all 47 species
Dcu_g03913 ATSLY1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01620 ATSLY1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40224 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023951001 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
MA_5013g0010 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g02060.1 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g12960 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08367 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36177 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11028 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo97797 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g112150.3.1 ATSLY1, Solyc01g112150 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g07440 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002799_P001 ATSLY1, Zm00001e002799 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
Zm00001e023511_P002 ATSLY1, Zm00001e023511 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 44 603
No external refs found!