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  5. LOC_Os03g25850.1

LOC_Os03g25850.1 (LOC_Os03g25850)


Aliases : LOC_Os03g25850

Description : no hits & (original description: none)


Gene families : OG0008924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25850.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT2G15020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.12 OrthoFinder output from all 47 species
Gb_17354 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_17359 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10376372g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_40181g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e002040_P001 Zm00001e002040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!